RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
NUP58-209ENST00000476553 SLC4A7Q9Y6M7 1214 aa7.66□□□□□ -1.18
NUP58-209ENST00000476553 MAFGO15525 162 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 NARSO43776 548 aaKnown RBP7.65□□□□□ -1.18
NUP58-209ENST00000476553 KLHL18O94889 574 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 RALYLQ86SE5 291 aaKnown RBP7.65□□□□□ -1.18
NUP58-209ENST00000476553 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 MRFAP1L1Q96HT8 127 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 GNRHR2Q96P88 292 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 INPP5FQ9Y2H2 1132 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 PCDHB4Q9Y5E5 795 aa7.65□□□□□ -1.18
NUP58-209ENST00000476553 ANKRD34BA5PLL1 514 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 ENPP3O14638 875 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 HGSO14964 777 aaPredicted RBP7.64□□□□□ -1.19
NUP58-209ENST00000476553 COL9A2Q14055 689 aaPredicted RBP7.64□□□□□ -1.19
NUP58-209ENST00000476553 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 CEP68Q76N32 757 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 RPUSD2Q8IZ73 545 aaKnown RBP7.64□□□□□ -1.19
NUP58-209ENST00000476553 CRACR2BQ8N4Y2 399 aaPredicted RBP7.64□□□□□ -1.19
NUP58-209ENST00000476553 TRMT2BQ96GJ1 504 aaKnown RBP7.64□□□□□ -1.19
NUP58-209ENST00000476553 ADOQ96SZ5 270 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 HSPBP1Q9NZL4 362 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 GABBR1Q9UBS5 961 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 ZDHHC9Q9Y397 364 aa7.64□□□□□ -1.19
NUP58-209ENST00000476553 CREB3O43889 395 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 DNAJC6O75061 913 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 TADA3O75528 432 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 GTF2A2P52657 109 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 NRN1LQ496H8 165 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 E4F1Q66K89 784 aaPredicted RBP7.63□□□□□ -1.19
NUP58-209ENST00000476553 IQCEQ6IPM2 695 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 POMZP3Q6PJE2 187 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 VPS37DQ86XT2 251 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 MCF2L2Q86YR7 1114 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 CCDC103Q8IW40 242 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 EDAQ92838 391 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 TRIM8Q9BZR9 551 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 SPC25Q9HBM1 224 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 CYP26B1Q9NR63 512 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 DDX56Q9NY93 547 aaKnown RBP7.63□□□□□ -1.19
NUP58-209ENST00000476553 FBXL7Q9UJT9 491 aa7.63□□□□□ -1.19
NUP58-209ENST00000476553 S100BP04271 92 aaPredicted RBP7.62□□□□□ -1.19
NUP58-209ENST00000476553 BCL6P41182 706 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 GIPRP48546 466 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 PTH1RQ03431 593 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 ZNF394Q53GI3 561 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 GTF2IRD2BQ6EKJ0 949 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 TMC5Q6UXY8 1006 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 GTF2IRD2Q86UP8 949 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 TRIM59Q8IWR1 403 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 CCDC146Q8IYE0 955 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 BVESQ8NE79 360 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 CRBNQ96SW2 442 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 NKX2-4Q9H2Z4 354 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 TERF2IPQ9NYB0 399 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 ZFR2Q9UPR6 939 aaKnown RBP7.62□□□□□ -1.19
NUP58-209ENST00000476553 PCDHGB7Q9Y5F8 929 aa7.62□□□□□ -1.19
NUP58-209ENST00000476553 MCM7P33993 719 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 NANOS3P60323 173 aaKnown RBP7.61□□□□□ -1.19
NUP58-209ENST00000476553 USP39Q53GS9 565 aaKnown RBP7.61□□□□□ -1.19
NUP58-209ENST00000476553 STEAP3Q658P3 488 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 Q6ZUG5 572 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 ZNF654Q8IZM8 581 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 OR6P1Q8NGX9 317 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 TMEM169Q96HH4 297 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 LMF1Q96S06 567 aa7.61□□□□□ -1.19
NUP58-209ENST00000476553 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
NUP58-209ENST00000476553 G3BP2Q9UN86 482 aaKnown RBP7.61□□□□□ -1.19
NUP58-209ENST00000476553 COA3Q9Y2R0 106 aaPredicted RBP7.61□□□□□ -1.19
NUP58-209ENST00000476553 ARNTLO00327 626 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 FGRP09769 529 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 CSF2RBP32927 897 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 SOX9P48436 509 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 EIF6P56537 245 aaKnown RBP7.6□□□□□ -1.19
NUP58-209ENST00000476553 KCNAB2Q13303 367 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 PROSER1Q86XN7 944 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 STAG1Q8WVM7 1258 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 AJUBAQ96IF1 538 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 MRGPRX3Q96LB0 322 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 TMEFF2Q9UIK5 374 aaPredicted RBP7.6□□□□□ -1.19
NUP58-209ENST00000476553 PRKAB1Q9Y478 270 aa7.6□□□□□ -1.19
NUP58-209ENST00000476553 PPP1R12AO14974 1030 aaPredicted RBP7.59□□□□□ -1.19
NUP58-209ENST00000476553 CHGBP05060 677 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 TBX4P57082 545 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 TESK1Q15569 626 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 DTX3Q8N9I9 347 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 LRRC37BQ96QE4 947 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 TMX1Q9H3N1 280 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
NUP58-209ENST00000476553 H7BY64 318 aa7.58□□□□□ -1.2
NUP58-209ENST00000476553 MYO1BO43795 1136 aa7.58□□□□□ -1.2
NUP58-209ENST00000476553 PPFIA4O75335 1185 aa7.58□□□□□ -1.2
NUP58-209ENST00000476553 COMTP21964 271 aa7.58□□□□□ -1.2
NUP58-209ENST00000476553 INHBCP55103 352 aa7.58□□□□□ -1.2
NUP58-209ENST00000476553 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
NUP58-209ENST00000476553 HNRNPA0Q13151 305 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms