RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 ANKRD13CQ8N6S4 541 aa6.62□□□□□ -1.35
HNRNPU-208ENST00000475997 DYNLL2Q96FJ2 89 aa6.62□□□□□ -1.35
HNRNPU-208ENST00000475997 SLC39A2Q9NP94 309 aa6.62□□□□□ -1.35
HNRNPU-208ENST00000475997 PRDM4Q9UKN5 801 aa6.62□□□□□ -1.35
HNRNPU-208ENST00000475997 CALUO43852 315 aaPredicted RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PRDX5P30044 214 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 MRPL12P52815 198 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CYP27A1Q02318 531 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CUL3Q13618 768 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 UPF3AQ9H1J1 476 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 SPC25Q9HBM1 224 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 NLRC4Q9NPP4 1024 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM217BQ9NTX9 383 aaPredicted RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 RWDD2AQ9UIY3 292 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 XRN1Q8IZH2 1706 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 HMGB3O15347 200 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 NDUFA10O95299 355 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FXR1P51114 621 aaKnown RBP eCLIP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 HDAC4P56524 1084 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 STX1BP61266 288 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 MRPS15P82914 257 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM133BQ5BKY9 247 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 TCP11X2Q5H9J9 407 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 NXNQ6DKJ4 435 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 RAD9BQ6WBX8 426 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 RRAGAQ7L523 313 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT25Q7Z3Z0 450 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PODNQ7Z5L7 613 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 ABCB6Q9NP58 842 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FMN2Q9NZ56 1722 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 USP17L3A6NCW0 530 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 USP17L4A6NCW7 530 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 KDM1AO60341 852 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CTNND1O60716 968 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PRCPP42785 496 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 EIF3BP55884 814 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 SNX1Q13596 522 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CASC4Q6P4E1 433 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 USP17L1Q7RTZ2 530 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 REXO1Q8N1G1 1221 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 FNBP1Q96RU3 617 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CPVLQ9H3G5 476 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PLEKHA4Q9H4M7 779 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 TBC1D7Q9P0N9 293 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PNPLA7Q6ZV29 1317 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PP2D1A8MPX8 630 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 C6orf118Q5T5N4 469 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 DCUN1D2Q6PH85 259 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 ZNF34Q8IZ26 560 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 CNPY4Q8N129 248 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 SRBD1Q8N5C6 995 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 EYA3Q99504 573 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 MTA3Q9BTC8 594 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 MKL2Q9ULH7 1088 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 PCDHA4Q9UN74 947 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 NWD1Q149M9 1564 aa6.61□□□□□ -1.35
HNRNPU-208ENST00000475997 SPAG7O75391 227 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DAB1O75553 588 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GNA14O95837 355 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 MCF2P10911 925 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 GARSP41250 739 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 RWDD2BP57060 319 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CDR2Q01850 454 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 STRN3Q13033 797 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 SLC30A9Q6PML9 568 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CELF1Q92879 486 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 BRIP1Q9BX63 1249 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 NBPF3Q9H094 633 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ADAM21Q9UKJ8 722 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 MINPP1Q9UNW1 487 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 JCADQ9P266 1359 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 RIMBP2O15034 1052 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT75O95678 551 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 OR52Z1P0C646 297 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT10P13645 584 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 KRT5P13647 590 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 FAM98CQ17RN3 349 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 CDKL2Q92772 493 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 SH3GL2Q99962 352 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ABHD10Q9NUJ1 306 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ZNF711Q9Y462 761 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ZNF804BA4D1E1 1349 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 ZNF335Q9H4Z2 1342 aaPredicted RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 DCTN3O75935 186 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 UFL1O94874 794 aa6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 HARSP12081 509 aaKnown RBP6.6□□□□□ -1.35
HNRNPU-208ENST00000475997 H2AFXP16104 143 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms