RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ADORA2AP29274 412 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 SREBF1P36956 1147 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ADCYAP1R1P41586 468 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 HSD17B4P51659 736 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 AMPD3Q01432 767 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 FAM160A1Q05DH4 1040 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 NBR1Q14596 966 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ZRSR1Q15695 479 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF174Q15697 407 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 LETM2Q2VYF4 491 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 USH1GQ495M9 461 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 KIAA1755Q5JYT7 1200 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 CCDC183Q5T5S1 534 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 JAKMIP3Q5VZ66 844 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 FAM173BQ6P4H8 233 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 CCDC174Q6PII3 467 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 RIOX2Q8IUF8 465 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ABRAQ8N0Z2 381 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 DNERQ8NFT8 737 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 NSUN6Q8TEA1 469 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 CDHR1Q96JP9 859 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 IWS1Q96ST2 819 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 SDF4Q9BRK5 362 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 MOV10L1Q9BXT6 1211 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 CPVLQ9H3G5 476 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 CUEDC2Q9H467 287 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ADD3Q9UEY8 706 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 PCDHB6Q9Y5E3 794 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 MYO9BQ13459 2157 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 TRIM43BA6NCK2 446 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 NEMFO60524 1076 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 CFBP00751 764 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 OR52Z1P0C646 297 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 ALAS1P13196 640 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 MUTP22033 750 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 MCM7P33993 719 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 UBA7P41226 1012 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 SYKP43405 635 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 SETQ01105 290 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 TLE2Q04725 743 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 LRRC41Q15345 812 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 INF2Q27J81 1249 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 TJAP1Q5JTD0 557 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 AXDND1Q5T1B0 1012 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 RESP18Q5W5W9 173 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 KCNV1Q6PIU1 500 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 USP17L6PQ6QN14 398 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 RNF207Q6ZRF8 634 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 CPXCR1Q8N123 301 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 FSIP1Q8NA03 581 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 IQUBQ8NA54 791 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 TRIM43Q96BQ3 446 aaPredicted RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 PGBD1Q96JS3 809 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 RNPC3Q96LT9 517 aaKnown RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 MBOAT7Q96N66 472 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 ANO3Q9BYT9 981 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 CCSER1Q9C0I3 900 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 SPATC1LQ9H0A9 340 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 ACAD9Q9H845 621 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 MAGEF1Q9HAY2 307 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 RAVER2Q9HCJ3 691 aaKnown RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 FBXO28Q9NVF7 368 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 DDX25Q9UHL0 483 aaKnown RBP7.91□□□□□ -1.14
SHQ1-207ENST00000475558 NRBP1Q9UHY1 535 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 PCDHA12Q9UN75 941 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF536O15090 1300 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 SMCHD1A6NHR9 2005 aa7.91□□□□□ -1.14
SHQ1-207ENST00000475558 EYSQ5T1H1 3165 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF236Q9UL36 1845 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 TNFRSF10AO00220 468 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 KIAA0355O15063 1070 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 COBLO75128 1261 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF202O95125 648 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 CLTBP09497 229 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 RARBP10826 455 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 FCER1AP12319 257 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 RAG1P15918 1043 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ERCC3P19447 782 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 MARCKSP29966 332 aaPredicted RBP7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF445P59923 1031 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ARHGAP4P98171 946 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 CALCRLQ16602 461 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 PRAMEF19Q5SWL8 479 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 PCNX4Q63HM2 1172 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 SNRNP48Q6IEG0 339 aaKnown RBP7.9□□□□□ -1.14
SHQ1-207ENST00000475558 RNF180Q86T96 592 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 NLRX1Q86UT6 975 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 C4orf32Q8N8J7 132 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 REPS2Q8NFH8 660 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ERMNQ8TAM6 284 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 CLEC4DQ8WXI8 215 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
SHQ1-207ENST00000475558 CALML4Q96GE6 196 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms