RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-205ENST00000474996 ATP9AO75110 1047 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-205ENST00000474996 MCM5P33992 734 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-205ENST00000474996 GNAQP50148 359 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 FAM26DQ5JW98 314 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 GIMAP8Q8ND71 665 aaPredicted RBP16.52■□□□□ 0.24
COL2A1-205ENST00000474996 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
COL2A1-205ENST00000474996 NRCAMQ92823 1304 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 KCNA2P16389 499 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 ITGB5P18084 799 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 KCNA5P22460 613 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 UBE2SQ16763 222 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 APBB2Q92870 758 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
COL2A1-205ENST00000474996 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
COL2A1-205ENST00000474996 RALGAPA2Q2PPJ7 1873 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 SLC27A2O14975 620 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 CHRNA1P02708 482 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 MARK3P27448 753 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 PTPROQ16827 1216 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL2A1-205ENST00000474996 MRPL38Q96DV4 380 aaKnown RBP16.5■□□□□ 0.23
COL2A1-205ENST00000474996 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
COL2A1-205ENST00000474996 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
COL2A1-205ENST00000474996 GSTTP1A0A1W2PQM5 241 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 H3BNC9 293 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 CALM1P0DP23 149 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 CALM2P0DP24 149 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 CALM3P0DP25 149 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 GHRP10912 638 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 LIFRP42702 1097 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 PPFIA1Q13136 1202 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 GPM6BQ13491 265 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 LEXMQ3ZCV2 418 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 TAF2Q6P1X5 1199 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 TMEM192Q8IY95 271 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-205ENST00000474996 SEPT1Q8WYJ6 367 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 LRRC2Q9BYS8 371 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 UBIAD1Q9Y5Z9 338 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
COL2A1-205ENST00000474996 MYO7AQ13402 2215 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 SPDYE3A6NKU9 549 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 MGAT3Q09327 533 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 MTMR1Q13613 665 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 GRIK4Q16099 956 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 RPAINQ86UA6 219 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 BANK1Q8NDB2 785 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 GLG1Q92896 1179 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 ESYT1Q9BSJ8 1104 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 LRFN3Q9BTN0 628 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 EHMT1Q9H9B1 1298 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 ERAP1Q9NZ08 941 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 PCDHA6Q9UN73 950 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 PCDHA8Q9Y5H6 950 aa16.48■□□□□ 0.23
COL2A1-205ENST00000474996 ATG2AQ2TAZ0 1938 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 IL9P15248 144 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 LPIN1Q14693 890 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 TIGD5Q53EQ6 642 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 DNAJB3Q8WWF6 145 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 JADE2Q9NQC1 790 aa16.47■□□□□ 0.23
COL2A1-205ENST00000474996 MBLAC1A4D2B0 266 aaPredicted RBP16.46■□□□□ 0.23
COL2A1-205ENST00000474996 CTNNB1P35222 781 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 PLA2G5P39877 138 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 IGBP1P78318 339 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 TCEAL5Q5H9L2 206 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 TMEM31Q5JXX7 168 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 MARCH8Q5T0T0 291 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
COL2A1-205ENST00000474996 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 FAM178BQ8IXR5 827 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 FIBCD1Q8N539 461 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 ZBTB10Q96DT7 871 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 CDY2AQ9Y6F7 541 aa16.46■□□□□ 0.23
COL2A1-205ENST00000474996 LOXHD1Q8IVV2 1947 aa16.45■□□□□ 0.22
COL2A1-205ENST00000474996 TTC3P53804 2025 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms