RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 NBR1Q14596 966 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 KIAA0753Q2KHM9 967 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 C9orf50Q5SZB4 431 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 MCTP2Q6DN12 878 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 RASGRP4Q8TDF6 673 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 CRYGNQ8WXF5 182 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 DDX27Q96GQ7 796 aaKnown RBP17.19■□□□□ 0.34
CALD1-215ENST00000472096 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 PKD2L1Q9P0L9 805 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
CALD1-215ENST00000472096 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
CALD1-215ENST00000472096 MAFGO15525 162 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 SP4Q02446 784 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 PPIGQ13427 754 aaKnown RBP eCLIP17.18■□□□□ 0.34
CALD1-215ENST00000472096 SHHQ15465 462 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 CEP55Q53EZ4 464 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 GDF6Q6KF10 455 aaPredicted RBP17.18■□□□□ 0.34
CALD1-215ENST00000472096 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 CYP2W1Q8TAV3 490 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 WNT8AQ9H1J5 351 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 HDAC6Q9UBN7 1215 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 GTF2IRD1Q9UHL9 959 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 GBF1Q92538 1859 aa17.18■□□□□ 0.34
CALD1-215ENST00000472096 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 SLC34A2O95436 690 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 CSF2RAP15509 400 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 NLRP5P59047 1200 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 ME3Q16798 604 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
CALD1-215ENST00000472096 C7orf31Q8N865 590 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 CTAGE1Q96RT6 745 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
CALD1-215ENST00000472096 H3BRB1 525 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 MEIS1O00470 390 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 CYP3A4P08684 503 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 ARP10275 920 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 ZNF76P36508 570 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 CCL23P55773 120 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 E2F4Q16254 413 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 PTGISQ16647 500 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 NIPA1Q7RTP0 329 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 LRCH3Q96II8 777 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 TUT1Q9H6E5 874 aaKnown RBP17.16■□□□□ 0.34
CALD1-215ENST00000472096 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
CALD1-215ENST00000472096 PCDHA4Q9UN74 947 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 NFASCO94856 1347 aa17.16■□□□□ 0.34
CALD1-215ENST00000472096 IGLV3-22A0A075B6J6 115 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 FAM86B1E9PN63 330 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 FAM86B2P0C5J1 330 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
CALD1-215ENST00000472096 NPY5RQ15761 445 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
CALD1-215ENST00000472096 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 KIF2CQ99661 725 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
CALD1-215ENST00000472096 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
CALD1-215ENST00000472096 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
CALD1-215ENST00000472096 ZNF215Q9UL58 517 aaPredicted RBP17.15■□□□□ 0.34
CALD1-215ENST00000472096 SIP14410 1827 aa17.14■□□□□ 0.34
CALD1-215ENST00000472096 SZT2Q5T011 3432 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 LAMA2P24043 3122 aaKnown RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 GSTTP1A0A1W2PQM5 241 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 DTNBO60941 627 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 SMIM10L2AP0DMW4 78 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 SMIM10L2BP0DMW5 78 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 ACRP10323 421 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 HOXC8P31273 242 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 ITGB3BPQ13352 177 aaPredicted RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 BFSP2Q13515 415 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 HIC1Q14526 733 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 PSRC1Q6PGN9 363 aaPredicted RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 C16orf59Q7L2K0 433 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 BLIDQ8IZY5 108 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 DHX38Q92620 1227 aaKnown RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 SCLYQ96I15 445 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
CALD1-215ENST00000472096 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 IL23AQ9NPF7 189 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 SLC9A2Q9UBY0 812 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
CALD1-215ENST00000472096 PTPRSQ13332 1948 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 M0R2N6 131 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 CIITAP33076 1130 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
CALD1-215ENST00000472096 RBL2Q08999 1139 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 TMEM240Q5SV17 173 aa17.13■□□□□ 0.33
CALD1-215ENST00000472096 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms