RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 CXCR5P32302 372 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ANTXR2P58335 489 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 VSNL1P62760 191 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 DR1Q01658 176 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 REXO1L1PQ8IX06 675 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 MORC4Q8TE76 937 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 GJA10Q969M2 543 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
RRP1B-202ENST00000470886 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ATRNO75882 1429 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 RHOBTB3O94955 611 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 RFX1P22670 979 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 POLR2BP30876 1174 aaKnown RBP11.43□□□□□ -0.58
RRP1B-202ENST00000470886 PTK2Q05397 1052 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 LRRC41Q15345 812 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ATP2A3Q93084 1043 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ZMYND12Q9H0C1 365 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 TXLNGQ9NUQ3 528 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 LRRC53A6NM62 1247 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 MYO1FO00160 1098 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 TRIM42Q8IWZ5 723 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 ZNF34Q8IZ26 560 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 LRRC8CQ8TDW0 803 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 TBC1D31Q96DN5 1066 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PLEKHA4Q9H4M7 779 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 NSFP46459 744 aaKnown RBP11.42□□□□□ -0.58
RRP1B-202ENST00000470886 FMR1Q06787 632 aaKnown RBP eCLIP11.42□□□□□ -0.583e-9■■■■□ 19.7
RRP1B-202ENST00000470886 MAP7D1Q3KQU3 841 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 MGARPQ8TDB4 240 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 NOVA2Q9UNW9 492 aaKnown RBP11.42□□□□□ -0.58
RRP1B-202ENST00000470886 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 FOXN1O15353 648 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PALMO75781 387 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 CLTAP09496 248 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PABPC4Q13310 644 aaKnown RBP eCLIP11.42□□□□□ -0.581e-26■■■■■ 39.3
RRP1B-202ENST00000470886 PDIA5Q14554 519 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PALM2Q8IXS6 379 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 C8orf37Q96NL8 207 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 TAF1DQ9H5J8 278 aaPredicted RBP11.42□□□□□ -0.58
RRP1B-202ENST00000470886 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 HPS5Q9UPZ3 1129 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 FAM187AA6NFU0 413 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 RASGRF2O14827 1237 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 USP17L8P0C7I0 530 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 P4HA1P13674 534 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 CDK8P49336 464 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PLTPP55058 493 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 CAV1Q03135 178 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 SPATA4Q8NEY3 305 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 EEF2KMTQ96G04 330 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
RRP1B-202ENST00000470886 DCP1AQ9NPI6 582 aaPredicted RBP11.42□□□□□ -0.58
RRP1B-202ENST00000470886 PKD2L1Q9P0L9 805 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
RRP1B-202ENST00000470886 GFPT2O94808 682 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 TNNI1P19237 187 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 NAALADL2Q58DX5 795 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 TTC19Q6DKK2 380 aaPredicted RBP11.41□□□□□ -0.58
RRP1B-202ENST00000470886 PPM1KQ8N3J5 372 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 AFAP1L2Q8N4X5 818 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 RSAD2Q8WXG1 361 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 ODF2LQ9ULJ1 636 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 SLC8A3P57103 927 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 HLFQ16534 295 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 SBK1Q52WX2 424 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 WDR93Q6P2C0 686 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 PDXDC1Q6P996 788 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 LRIG3Q6UXM1 1119 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 HAUS1Q96CS2 278 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 SCARF1Q14162 830 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 MESDQ14696 234 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 PTPAQ15257 358 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 CCNI2Q6ZMN8 369 aaPredicted RBP11.41□□□□□ -0.58
RRP1B-202ENST00000470886 CFAP57Q96MR6 1250 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 MRPL47Q9HD33 250 aaKnown RBP11.41□□□□□ -0.58
RRP1B-202ENST00000470886 TMOD4Q9NZQ9 345 aa11.41□□□□□ -0.58
RRP1B-202ENST00000470886 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
RRP1B-202ENST00000470886 GMNCA6NCL1 334 aa11.4□□□□□ -0.58
RRP1B-202ENST00000470886 ATP5HO75947 161 aa11.4□□□□□ -0.58
RRP1B-202ENST00000470886 ATP1A1P05023 1023 aaKnown RBP11.4□□□□□ -0.58
RRP1B-202ENST00000470886 GYS2P54840 703 aa11.4□□□□□ -0.58
RRP1B-202ENST00000470886 NR1H3Q13133 447 aa11.4□□□□□ -0.58
RRP1B-202ENST00000470886 DMP1Q13316 513 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms