RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CYP2W1Q8TAV3 490 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 PBX4Q9BYU1 374 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 SEMA6BQ9H3T3 888 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 KCNH7Q9NS40 1196 aa16.07■□□□□ 0.16
COMMD3-208ENST00000470045 ZNF215Q9UL58 517 aaPredicted RBP16.07■□□□□ 0.16
COMMD3-208ENST00000470045 SIP14410 1827 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 NFASCO94856 1347 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 GRXCR1A8MXD5 290 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 MEIS1O00470 390 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 CYP3A4P08684 503 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 ADAM17P78536 824 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 SP4Q02446 784 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
COMMD3-208ENST00000470045 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 SLC26A6Q9BXS9 759 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 RNPEPQ9H4A4 650 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 PDRG1Q9NUG6 133 aa16.06■□□□□ 0.16
COMMD3-208ENST00000470045 CXCL10P02778 98 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 ARP10275 920 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 GNA11P29992 359 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 PBX2P40425 430 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 AKAP17AQ02040 695 aaKnown RBP16.05■□□□□ 0.16
COMMD3-208ENST00000470045 JAKMIP3Q5VZ66 844 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 JPH1Q9HDC5 661 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-208ENST00000470045 SH3GLB2Q9NR46 395 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
COMMD3-208ENST00000470045 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 NBNO60934 754 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 LGR5O75473 907 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 BAIAP3O94812 1187 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 ACTN1P12814 892 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-208ENST00000470045 RAB30Q15771 203 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 UTP14CQ5TAP6 766 aaKnown RBP16.04■□□□□ 0.16
COMMD3-208ENST00000470045 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 CDX2Q99626 313 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-208ENST00000470045 AGO4Q9HCK5 861 aaKnown RBP16.04■□□□□ 0.16
COMMD3-208ENST00000470045 PKD2L1Q9P0L9 805 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
COMMD3-208ENST00000470045 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 TREHO43280 583 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 CAND2O75155 1236 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 GNAT1P11488 350 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 TRIM22Q8IYM9 498 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 FAM177A1Q8N128 213 aaPredicted RBP16.03■□□□□ 0.16
COMMD3-208ENST00000470045 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 LMBR1Q8WVP7 490 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 PCYT2Q99447 389 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
COMMD3-208ENST00000470045 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 ERAP1Q9NZ08 941 aa16.03■□□□□ 0.16
COMMD3-208ENST00000470045 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 CPLX1O14810 134 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
COMMD3-208ENST00000470045 DEXIO95424 95 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
COMMD3-208ENST00000470045 CIITAP33076 1130 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.16
COMMD3-208ENST00000470045 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 SLC9A7Q96T83 725 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 SDF4Q9BRK5 362 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 FTOQ9C0B1 505 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD3-208ENST00000470045 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 ZNF576Q9H609 170 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 YBX2Q9Y2T7 364 aaKnown RBP16.02■□□□□ 0.16
COMMD3-208ENST00000470045 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.16
COMMD3-208ENST00000470045 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
COMMD3-208ENST00000470045 ATG7O95352 703 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 ACTR2P61160 394 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
COMMD3-208ENST00000470045 SCRN1Q12765 414 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 STK3Q13188 491 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 NPY5RQ15761 445 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 TCTN1Q2MV58 587 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 CPLX2Q6PUV4 134 aaKnown RBP16.01■□□□□ 0.15
COMMD3-208ENST00000470045 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 PHOSPHO2Q8TCD6 241 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 RASGRP4Q8TDF6 673 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 MSRAQ9UJ68 235 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 CHD7Q9P2D1 2997 aa16.01■□□□□ 0.15
COMMD3-208ENST00000470045 STK36Q9NRP7 1315 aa16■□□□□ 0.15
COMMD3-208ENST00000470045 IGKV6D-21A0A0A0MT36 114 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms