RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SEPT1Q8WYJ6 367 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 HSD17B14Q9BPX1 270 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 POLR3CQ9BUI4 534 aaPredicted RBP23.39■■□□□ 1.33
BRAF-202ENST00000469930 UPF3AQ9H1J1 476 aaKnown RBP23.39■■□□□ 1.33
BRAF-202ENST00000469930 BCAS3Q9H6U6 928 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 HMX1Q9NP08 348 aaPredicted RBP23.39■■□□□ 1.33
BRAF-202ENST00000469930 DISC1Q9NRI5 854 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 LMBRD1Q9NUN5 540 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 PKD2L1Q9P0L9 805 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 PCDHA10Q9Y5I2 948 aa23.39■■□□□ 1.33
BRAF-202ENST00000469930 EML1O00423 815 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 ACTR2P61160 394 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 TMEM63BQ5T3F8 832 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 MIER3Q7Z3K6 550 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 COPS5Q92905 334 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 GPR20Q99678 358 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 TUFT1Q9NNX1 390 aa23.38■■□□□ 1.33
BRAF-202ENST00000469930 GSTTP1A0A1W2PQM5 241 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 GOLGA6L4A6NEF3 574 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 POTEMA6NI47 508 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 A6NJR5 290 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 PPFIA4O75335 1185 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 PRPF40AO75400 957 aaKnown RBP23.37■■□□□ 1.33
BRAF-202ENST00000469930 PTMSP20962 102 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 RPA1P27694 616 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 CCND3P30281 292 aaPredicted RBP23.37■■□□□ 1.33
BRAF-202ENST00000469930 UBA7P41226 1012 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 GJA9P57773 515 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 SLC9C1Q4G0N8 1177 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 KRT79Q5XKE5 535 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 HAUS3Q68CZ6 603 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 MIS18BP1Q6P0N0 1132 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 ARMC5Q96C12 935 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 SPATA33Q96N06 139 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 UIMC1Q96RL1 719 aa23.37■■□□□ 1.33
BRAF-202ENST00000469930 MMTAG2Q9BU76 263 aaKnown RBP23.37■■□□□ 1.33
BRAF-202ENST00000469930 DDX20Q9UHI6 824 aaKnown RBP23.37■■□□□ 1.33
BRAF-202ENST00000469930 POTEFA5A3E0 1075 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 DDX11L8A8MPP1 907 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 DDX39AO00148 427 aaKnown RBP23.36■■□□□ 1.33
BRAF-202ENST00000469930 LGR5O75473 907 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 P4HBP07237 508 aaKnown RBP23.36■■□□□ 1.33
BRAF-202ENST00000469930 PSAPP07602 524 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 RARBP10826 455 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 HSDL1Q3SXM5 330 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 NCAPH2Q6IBW4 605 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 TLK2Q86UE8 772 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 OR6J1Q8NGC5 347 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 SYMPKQ92797 1274 aaKnown RBP23.36■■□□□ 1.33
BRAF-202ENST00000469930 EIF2AK1Q9BQI3 630 aaKnown RBP23.36■■□□□ 1.33
BRAF-202ENST00000469930 PYM1Q9BRP8 204 aaKnown RBP23.36■■□□□ 1.33
BRAF-202ENST00000469930 FAM13BQ9NYF5 915 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 HPSEQ9Y251 543 aa23.36■■□□□ 1.33
BRAF-202ENST00000469930 DKC1O60832 514 aaKnown RBP eCLIP23.35■■□□□ 1.339e-6■■■■■ 32.4
BRAF-202ENST00000469930 SLITRK3O94933 977 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 LYPLA2O95372 231 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 SUPT20HL2P0C7V6 817 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 TXLNAP40222 546 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 CABP7Q86V35 215 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 AFAP1L1Q8TED9 768 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 MRPS27Q92552 414 aaKnown RBP23.35■■□□□ 1.33
BRAF-202ENST00000469930 EPSTI1Q96J88 318 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 AP5M1Q9H0R1 490 aa23.35■■□□□ 1.33
BRAF-202ENST00000469930 KDM3AQ9Y4C1 1321 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 NOP56O00567 594 aaKnown RBP23.34■■□□□ 1.33
BRAF-202ENST00000469930 DYNC1LI2O43237 492 aaPredicted RBP23.34■■□□□ 1.33
BRAF-202ENST00000469930 SPATA31C1P0DKV0 1188 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 CNGA1P29973 690 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 CPT1AP50416 773 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 GJC2Q5T442 439 aaPredicted RBP23.34■■□□□ 1.33
BRAF-202ENST00000469930 USP49Q70CQ1 688 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 SH3TC2Q8TF17 1288 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 NT5C3AQ9H0P0 336 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 PAK6Q9NQU5 681 aaPredicted RBP23.34■■□□□ 1.33
BRAF-202ENST00000469930 MAFBQ9Y5Q3 323 aaPredicted RBP23.34■■□□□ 1.33
BRAF-202ENST00000469930 DOCK5Q9H7D0 1870 aa23.34■■□□□ 1.33
BRAF-202ENST00000469930 EMSYQ7Z589 1322 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 PP2D1A8MPX8 630 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 CTAGE5O15320 804 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 CHMP2AO43633 222 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 KPNA6O60684 536 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 GADD45BO75293 160 aaPredicted RBP23.33■■□□□ 1.33
BRAF-202ENST00000469930 XRCC6P12956 609 aaKnown RBP eCLIP23.33■■□□□ 1.331e-5■■■□□ 14.9
BRAF-202ENST00000469930 CAPN2P17655 700 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 CST5P28325 142 aaPredicted RBP23.33■■□□□ 1.33
BRAF-202ENST00000469930 QARSP47897 775 aaKnown RBP23.33■■□□□ 1.33
BRAF-202ENST00000469930 BRDTQ58F21 947 aaPredicted RBP23.33■■□□□ 1.33
BRAF-202ENST00000469930 PLPPR4Q7Z2D5 763 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 CATSPER3Q86XQ3 398 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 SNX29Q8TEQ0 813 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 AFG1LQ8WV93 481 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.33■■□□□ 1.339e-8■■■■■ 31.3
BRAF-202ENST00000469930 SPC25Q9HBM1 224 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 CCDC39Q9UFE4 941 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 SAMM50Q9Y512 469 aa23.33■■□□□ 1.33
BRAF-202ENST00000469930 ADAMTS4O75173 837 aa23.32■■□□□ 1.32
BRAF-202ENST00000469930 MMP3P08254 477 aa23.32■■□□□ 1.32
BRAF-202ENST00000469930 TCF7P36402 384 aaPredicted RBP23.32■■□□□ 1.32
BRAF-202ENST00000469930 SLC26A2P50443 739 aa23.32■■□□□ 1.32
BRAF-202ENST00000469930 PSMC5P62195 406 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 334.4 ms