RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RASIP1Q5U651 963 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 SESTD1Q86VW0 696 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 KATNAL1Q9BW62 490 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 TTYH1Q9H313 450 aaPredicted RBP20.02■□□□□ 0.8
MRPL28-208ENST00000469744 GTF2IRD1Q9UHL9 959 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 PCDHA6Q9UN73 950 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 PCDHA8Q9Y5H6 950 aa20.02■□□□□ 0.8
MRPL28-208ENST00000469744 TET1Q8NFU7 2136 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 HAS3O00219 553 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 NOP56O00567 594 aaKnown RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 GADD45BO75293 160 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 PPFIA4O75335 1185 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 CTDNEP1O95476 244 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 ZNF200P98182 395 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 XRRA1Q6P2D8 792 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 HERVK_113Q902F9 699 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 DHX38Q92620 1227 aaKnown RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 C16orf70Q9BSU1 422 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 SCAND2PQ9GZW5 306 aaPredicted RBP20.01■□□□□ 0.79
MRPL28-208ENST00000469744 PKD2L1Q9P0L9 805 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 CHD9Q3L8U1 2897 aa20.01■□□□□ 0.79
MRPL28-208ENST00000469744 ITGB5P18084 799 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 DNAJB2P25686 324 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 PBX2P40425 430 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 ADCY7P51828 1080 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 RCAN1P53805 252 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 RESTQ13127 1097 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 NEDD9Q14511 834 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 HIC1Q14526 733 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 METTL7BQ6UX53 244 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 TRIM50Q86XT4 487 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 RETREG2Q8NC44 543 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 SEMA6BQ9H3T3 888 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 GDPD2Q9HCC8 539 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 TMEM260Q9NX78 707 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 EYSQ5T1H1 3165 aa20■□□□□ 0.79
MRPL28-208ENST00000469744 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 LGALS2P05162 132 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 IQCF3P0C7M6 154 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 FOXD4L6Q3SYB3 417 aaPredicted RBP19.99■□□□□ 0.79
MRPL28-208ENST00000469744 ATL3Q6DD88 541 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 FOXD4L3Q6VB84 417 aaPredicted RBP19.99■□□□□ 0.79
MRPL28-208ENST00000469744 NLRX1Q86UT6 975 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 RPUSD2Q8IZ73 545 aaKnown RBP19.99■□□□□ 0.79
MRPL28-208ENST00000469744 GPR20Q99678 358 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 RIC8AQ9NPQ8 531 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 BARHL2Q9NY43 387 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 SMCO2A6NFE2 343 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 ZBBXA8MT70 800 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 H3BQV1 296 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 ATP9AO75110 1047 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 BFSP2Q13515 415 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 CCDC183Q5T5S1 534 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 PPP1R18Q6NYC8 613 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 WNT8BQ93098 351 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 PHKBQ93100 1093 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 NCOA5Q9HCD5 579 aaKnown RBP19.99■□□□□ 0.79
MRPL28-208ENST00000469744 STXBP5LQ9Y2K9 1186 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 UBIAD1Q9Y5Z9 338 aa19.99■□□□□ 0.79
MRPL28-208ENST00000469744 CCDC196A0A1B0GTZ2 297 aa19.98■□□□□ 0.79
MRPL28-208ENST00000469744 H3BRB1 525 aa19.98■□□□□ 0.79
MRPL28-208ENST00000469744 CCT2P78371 535 aaKnown RBP19.98■□□□□ 0.79
MRPL28-208ENST00000469744 PFKFB3Q16875 520 aaPredicted RBP19.98■□□□□ 0.79
MRPL28-208ENST00000469744 UTP14CQ5TAP6 766 aaKnown RBP19.98■□□□□ 0.79
MRPL28-208ENST00000469744 GPRASP2Q96D09 838 aa19.98■□□□□ 0.79
MRPL28-208ENST00000469744 PBX4Q9BYU1 374 aa19.98■□□□□ 0.79
MRPL28-208ENST00000469744 TUT1Q9H6E5 874 aaKnown RBP19.98■□□□□ 0.79
MRPL28-208ENST00000469744 NID2Q14112 1375 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 hCG_1984214I3L0E3 225 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 ADAMTS3O15072 1205 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 SCG2P13521 617 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 KCNA2P16389 499 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 MTMR1Q13613 665 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 CCDC155Q8N6L0 562 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 ZNF713Q8N859 430 aaPredicted RBP19.97■□□□□ 0.79
MRPL28-208ENST00000469744 CYP2W1Q8TAV3 490 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 TIFAQ96CG3 184 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
MRPL28-208ENST00000469744 SENP7Q9BQF6 1050 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 ANO3Q9BYT9 981 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 FTOQ9C0B1 505 aaKnown RBP eCLIP19.97■□□□□ 0.79
MRPL28-208ENST00000469744 MTIF3Q9H2K0 278 aaKnown RBP19.97■□□□□ 0.79
MRPL28-208ENST00000469744 EHMT1Q9H9B1 1298 aa19.97■□□□□ 0.79
MRPL28-208ENST00000469744 MYO9BQ13459 2157 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 SMIM10L2AP0DMW4 78 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 SMIM10L2BP0DMW5 78 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 NASPP49321 788 aaPredicted RBP19.96■□□□□ 0.79
MRPL28-208ENST00000469744 PKN1Q16512 942 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 CAGE1Q8TC20 777 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 MYLIPQ8WY64 445 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 CFAP45Q9UL16 551 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 SLC4A7Q9Y6M7 1214 aa19.96■□□□□ 0.79
MRPL28-208ENST00000469744 PFKMP08237 780 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 CKBP12277 381 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 RABGGTBP53611 331 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 JAKMIP3Q5VZ66 844 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 LRRC8DQ7L1W4 858 aa19.95■□□□□ 0.78
MRPL28-208ENST00000469744 AFAP1L1Q8TED9 768 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms