RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GIT2Q14161 759 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 ASTE1Q2TB18 679 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-205ENST00000469687 Q4G0T1 1027 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
CBWD3-205ENST00000469687 TRIM59Q8IWR1 403 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 REEP2Q9BRK0 252 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 LSM14BQ9BX40 385 aaKnown RBP16.22■□□□□ 0.19
CBWD3-205ENST00000469687 PDE11AQ9HCR9 933 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 ERICH4A6NGS2 130 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 RSPH10B2B2RC85 870 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
CBWD3-205ENST00000469687 ZMYND10O75800 440 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 RSPH10BP0C881 870 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 USP14P54578 494 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 POLR2FP61218 127 aaKnown RBP16.21■□□□□ 0.19
CBWD3-205ENST00000469687 ADAM9Q13443 819 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 HAUS3Q68CZ6 603 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 C7orf43Q8WVR3 580 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 TBC1D5Q92609 795 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 CEP63Q96MT8 703 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 TSGA10Q9BZW7 698 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
CBWD3-205ENST00000469687 CLRN2A0PK11 232 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 ANO9A1A5B4 782 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 TCP10L2B9ZVM9 353 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 EML1O00423 815 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 N4BP1O75113 896 aaKnown RBP16.21■□□□□ 0.19
CBWD3-205ENST00000469687 RPA1P27694 616 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 HOXD13P35453 343 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 TUBB4BP68371 445 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 C2orf54Q08AI8 447 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 FAM83BQ5T0W9 1011 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 HDXQ7Z353 690 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 COG1Q8WTW3 980 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 PSMB7Q99436 277 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 VAV3Q9UKW4 847 aa16.21■□□□□ 0.19
CBWD3-205ENST00000469687 USO1O60763 962 aaKnown RBP16.2■□□□□ 0.18
CBWD3-205ENST00000469687 ERLIN1O75477 346 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 MYBP10242 640 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 MAGEA1P43355 309 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 MMP14P50281 582 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 RASSF7Q02833 373 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 TDRD12Q587J7 1177 aaKnown RBP16.2■□□□□ 0.18
CBWD3-205ENST00000469687 CAGE1Q8TC20 777 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 PKNOX2Q96KN3 472 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 RGL1Q9NZL6 768 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 CEP72Q9P209 647 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 NR2F2P24468 414 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 POLD1P28340 1107 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-205ENST00000469687 CASP8Q14790 479 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 WDR93Q6P2C0 686 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 SYT2Q8N9I0 419 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-205ENST00000469687 TRIM58Q8NG06 486 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 ZFP91Q96JP5 570 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-205ENST00000469687 HINFPQ9BQA5 517 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 RUSC1Q9BVN2 902 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 SNX12Q9UMY4 172 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 DNM3Q9UQ16 869 aa16.2■□□□□ 0.18
CBWD3-205ENST00000469687 LRRIQ3A6PVS8 624 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 TBX3O15119 743 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 NCK2O43639 380 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 ENTPD3O75355 529 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 PRPF6O94906 941 aaKnown RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CXCR5P32302 372 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 MARSP56192 900 aaKnown RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 ARID5AQ03989 594 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CREG2Q8IUH2 290 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CDAN1Q8IWY9 1227 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 ZC3H3Q8IXZ2 948 aaKnown RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 BHMT2Q9H2M3 363 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 SMARCAL1Q9NZC9 954 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 JRKLQ9Y4A0 524 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 UTRNP46939 3433 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 BUB1O43683 1085 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 C21orf2O43822 256 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 TACC1O75410 805 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CIITAP33076 1130 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CYP2C19P33261 490 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 UBXN2AP68543 259 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 KCNH2Q12809 1159 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 ENOX2Q16206 610 aaKnown RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 CC2D2BQ6DHV5 1058 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 GSPT2Q8IYD1 628 aaKnown RBP16.19■□□□□ 0.18
CBWD3-205ENST00000469687 ERMNQ8TAM6 284 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 WDR18Q9BV38 432 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 EHD2Q9NZN4 543 aa16.19■□□□□ 0.18
CBWD3-205ENST00000469687 IGLV3-22A0A075B6J6 115 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 GNA14O95837 355 aa16.18■□□□□ 0.18
CBWD3-205ENST00000469687 CFBP00751 764 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms