RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
SRRT-208ENST00000469602 GJB4Q9NTQ9 266 aa11.06□□□□□ -0.64
SRRT-208ENST00000469602 SLC9A2Q9UBY0 812 aa11.06□□□□□ -0.64
SRRT-208ENST00000469602 UMODL1Q5DID0 1318 aa11.06□□□□□ -0.64
SRRT-208ENST00000469602 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
SRRT-208ENST00000469602 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 EDIL3O43854 480 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 SMIM10L2AP0DMW4 78 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 SMIM10L2BP0DMW5 78 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 CSF2RAP15509 400 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
SRRT-208ENST00000469602 ACTR2P61160 394 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 PPIGQ13427 754 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■■□□□ 12.2
SRRT-208ENST00000469602 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
SRRT-208ENST00000469602 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 CCDC83Q8IWF9 413 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 LENG9Q96B70 501 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
SRRT-208ENST00000469602 ZNF577Q9BSK1 485 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 TBC1D22BQ9NU19 505 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 ERAP1Q9NZ08 941 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
SRRT-208ENST00000469602 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 CCDC194A0A1B0GVG4 234 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
SRRT-208ENST00000469602 LGR5O75473 907 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 CCNE2O96020 404 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 CYP3A7P24462 503 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 HOXC8P31273 242 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 CCL23P55773 120 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 BFSP2Q13515 415 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 TRIM29Q14134 588 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 HIC1Q14526 733 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 SHHQ15465 462 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 LRIT3Q3SXY7 679 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 OXER1Q8TDS5 423 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 GLG1Q92896 1179 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 BACH2Q9BYV9 841 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 AZI2Q9H6S1 392 aa11.04□□□□□ -0.64
SRRT-208ENST00000469602 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 C17orf102A2RUQ5 167 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 DDX39AO00148 427 aaKnown RBP11.03□□□□□ -0.64
SRRT-208ENST00000469602 TDP2O95551 362 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 MMP1P03956 469 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 GNAT1P11488 350 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 KRT2P35908 639 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
SRRT-208ENST00000469602 RBL2Q08999 1139 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 PTK7Q13308 1070 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 INF2Q27J81 1249 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 Q4G0T1 1027 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
SRRT-208ENST00000469602 MOXD1Q6UVY6 613 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 C16orf59Q7L2K0 433 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 SERINC5Q86VE9 423 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
SRRT-208ENST00000469602 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 SCLYQ96I15 445 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 PCYT2Q99447 389 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 BRMS1Q9HCU9 246 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 IL23AQ9NPF7 189 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
SRRT-208ENST00000469602 IGKV6D-21A0A0A0MT36 114 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 SOX1O00570 391 aaPredicted RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 MSH4O15457 936 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 TREHO43280 583 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 ATG7O95352 703 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 CD2BP2O95400 341 aaKnown RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 IQCF3P0C7M6 154 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 ACRP10323 421 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 MARK3P27448 753 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 RFC2P35250 354 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 MCM2P49736 904 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 SLC26A2P50443 739 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 STAT5BP51692 787 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 FOSBP53539 338 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 KRT76Q01546 638 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 NR5A1Q13285 461 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 LETM2Q2VYF4 491 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 KRT40Q6A162 431 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 ABHD15Q6UXT9 468 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 SMAP1Q8IYB5 467 aaPredicted RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 RPUSD2Q8IZ73 545 aaKnown RBP11.02□□□□□ -0.65
SRRT-208ENST00000469602 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
SRRT-208ENST00000469602 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms