RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FMR1Q06787 632 aaKnown RBP eCLIP10.88□□□□□ -0.67
NUP50-214ENST00000469163 UBE2SQ16763 222 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 BRAPQ7Z569 592 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 XPO4Q9C0E2 1151 aaKnown RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
NUP50-214ENST00000469163 ZNRF3Q9ULT6 936 aa10.88□□□□□ -0.67
NUP50-214ENST00000469163 DPPA5A6NC42 116 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 CHMP2AO43633 222 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 CUTAO60888 179 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 HOXD11P31277 338 aaPredicted RBP10.87□□□□□ -0.67
NUP50-214ENST00000469163 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 MAEAQ7L5Y9 396 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 WDR75Q8IWA0 830 aaKnown RBP10.87□□□□□ -0.67
NUP50-214ENST00000469163 OPTNQ96CV9 577 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 LNPEPQ9UIQ6 1025 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 WDR37Q9Y2I8 494 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 RBAK-RBAKDNI3L0D1 243 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 PFKFB2O60825 505 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 NR1I2O75469 434 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 HNRNPCP07910 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
NUP50-214ENST00000469163 BLMHQ13867 455 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 FAAH2Q6GMR7 532 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 TCHPQ9BT92 498 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 PAGR1Q9BTK6 254 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 TCEAL9Q9UHQ7 104 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 N4BP3O15049 544 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 ATP6V1G2O95670 118 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 CASP1P29466 404 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 C12orf60Q5U649 245 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 NSMFQ6X4W1 530 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 ZFAND2BQ8WV99 257 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
NUP50-214ENST00000469163 GGA3Q9NZ52 723 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 NOP53Q9NZM5 478 aaKnown RBP10.87□□□□□ -0.67
NUP50-214ENST00000469163 PPP2R2CQ9Y2T4 447 aa10.87□□□□□ -0.67
NUP50-214ENST00000469163 GRIN2DO15399 1336 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
NUP50-214ENST00000469163 SEMA3EO15041 775 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 LUC7L3O95232 432 aaKnown RBP10.86□□□□□ -0.67
NUP50-214ENST00000469163 CALM1P0DP23 149 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 CALM2P0DP24 149 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 CALM3P0DP25 149 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
NUP50-214ENST00000469163 SLMAPQ14BN4 828 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 MYOCDQ8IZQ8 938 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 IGDCC4Q8TDY8 1250 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 SPDYE5A6NIY4 337 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 KIF28PB7ZC32 967 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 INHBCP55103 352 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 STX1AQ16623 288 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 SMUG1Q53HV7 270 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 NAA35Q5VZE5 725 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 GRAMD1CQ8IYS0 662 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUP50-214ENST00000469163 KCNN1Q92952 543 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 ZWILCHQ9H900 591 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 CFAP45Q9UL16 551 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 HPCAL4Q9UM19 191 aa10.86□□□□□ -0.67
NUP50-214ENST00000469163 ATXN2Q99700 1313 aaKnown RBP10.86□□□□□ -0.67
NUP50-214ENST00000469163 CTAGE15A4D2H0 777 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 CTAGE8P0CG41 777 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ZFXP17010 805 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 STIP1P31948 543 aaKnown RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 TMED1Q13445 227 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 RCN1Q15293 331 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 C9orf131Q5VYM1 1079 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 CTAGE6Q86UF2 777 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 CTAGE4Q8IX94 777 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 CCDC155Q8N6L0 562 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ABTB1Q969K4 478 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 WRNIP1Q96S55 665 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 SYT17Q9BSW7 474 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ZNF341Q9BYN7 854 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 GLIS2Q9BZE0 524 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 TUBGCP4Q9UGJ1 667 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 MMEP08473 750 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 SPP2Q13103 211 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 STRIP1Q5VSL9 837 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ATL3Q6DD88 541 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 APOBEC3HQ6NTF7 200 aaKnown RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
NUP50-214ENST00000469163 EEPD1Q7L9B9 569 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 LCA5Q86VQ0 697 aa10.85□□□□□ -0.67
NUP50-214ENST00000469163 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms