RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PFKMP08237 780 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 IQCF3P0C7M6 154 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 ACRP10323 421 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 NEK4P51957 841 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 ST3GAL1Q11201 340 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 PTK7Q13308 1070 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 BFSP2Q13515 415 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 GPNMBQ14956 572 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 GALNT17Q6IS24 598 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 TRAF7Q6Q0C0 670 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 AFAP1L1Q8TED9 768 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 HERVK_113Q902F9 699 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 WNT8BQ93098 351 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 RNPC3Q96LT9 517 aaKnown RBP17.28■□□□□ 0.36
ATG4B-215ENST00000468018 PCYT2Q99447 389 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-215ENST00000468018 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
ATG4B-215ENST00000468018 CDH23Q9H251 3354 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 MICAL3Q7RTP6 2002 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 SMIM10L2AP0DMW4 78 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 SMIM10L2BP0DMW5 78 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 RFC2P35250 354 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 RBM25P49756 843 aaKnown RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 CHMP4BP1P59074 171 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 SMAD3P84022 425 aaKnown RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 FAM109BQ6ICB4 259 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 SERINC5Q86VE9 423 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 PHF20Q9BVI0 1012 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 RNPEPQ9H4A4 650 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.36
ATG4B-215ENST00000468018 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-215ENST00000468018 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.35
ATG4B-215ENST00000468018 IGKV6D-21A0A0A0MT36 114 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 USP11P51784 963 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 NLRP5P59047 1200 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 SP4Q02446 784 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 RPUSD2Q8IZ73 545 aaKnown RBP17.26■□□□□ 0.35
ATG4B-215ENST00000468018 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 CCDC155Q8N6L0 562 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
ATG4B-215ENST00000468018 NOD1Q9Y239 953 aa17.26■□□□□ 0.35
ATG4B-215ENST00000468018 EVPLQ92817 2033 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 C17orf102A2RUQ5 167 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 CCNE2O96020 404 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 CKBP12277 381 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 ACTR2P61160 394 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
ATG4B-215ENST00000468018 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
ATG4B-215ENST00000468018 CXXC1Q9P0U4 656 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-215ENST00000468018 IPO5O00410 1097 aaKnown RBP17.24■□□□□ 0.35
ATG4B-215ENST00000468018 TREHO43280 583 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 PARNO95453 639 aaKnown RBP17.24■□□□□ 0.35
ATG4B-215ENST00000468018 FGBP02675 491 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 CXCL10P02778 98 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 SELPP16109 830 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 ZNF76P36508 570 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 RETREG2Q8NC44 543 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 SMARCAD1Q9H4L7 1026 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
ATG4B-215ENST00000468018 MYO9BQ13459 2157 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 NRCAMQ92823 1304 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-215ENST00000468018 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-215ENST00000468018 CYP3A7P24462 503 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 MBTPS1Q14703 1052 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 ABHD15Q6UXT9 468 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 ATP6V0A1Q93050 837 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 SETD4Q9NVD3 440 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-215ENST00000468018 KCNJ14Q9UNX9 436 aa17.23■□□□□ 0.35
ATG4B-215ENST00000468018 MBLAC1A4D2B0 266 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-215ENST00000468018 NBNO60934 754 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 DTNBO60941 627 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 CAND2O75155 1236 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 Q4G0T1 1027 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 PRR16Q569H4 304 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 ZNF618Q5T7W0 954 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 ZNF577Q9BSK1 485 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
ATG4B-215ENST00000468018 TMEM265A0A087WTH1 108 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 MSH4O15457 936 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 GNAT1P11488 350 aa17.21■□□□□ 0.35
ATG4B-215ENST00000468018 XBP1P17861 261 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms