RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 B4GALT4O60513 344 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 GRK2P25098 689 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 GRK3P35626 688 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 NTRK3Q16288 839 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 NUDT10Q8NFP7 164 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 OSBP2Q969R2 916 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 NUDT11Q96G61 164 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 ARHGEF4Q9NR80 690 aa6.93□□□□□ -1.3
PRPF40A-205ENST00000467114 PATE3B3GLJ2 98 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 KNG1P01042 644 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 FAHP16930 419 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 SPIRE1Q08AE8 756 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 TUSC3Q13454 348 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 SMAD2Q15796 467 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 KIZQ2M2Z5 673 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 PAN2Q504Q3 1202 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 KCNT2Q6UVM3 1135 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 RBM12BQ8IXT5 1001 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 CDK5RAP1Q96SZ6 601 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 PTPN18Q99952 460 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 MEGF9Q9H1U4 602 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 ZDHHC9Q9Y397 364 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 NUB1Q9Y5A7 615 aa6.92□□□□□ -1.3
PRPF40A-205ENST00000467114 PRODHO43272 600 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 CKMP06732 381 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 PABPC1P11940 636 aaKnown RBP6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 COL6A2P12110 1019 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 EPHA5P54756 1037 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 RASA3Q14644 834 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 Q6ZUG5 572 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 SPRED1Q7Z699 444 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 ST13P5Q8NFI4 369 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 MKL1Q969V6 931 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 TELO2Q9Y4R8 837 aa6.91□□□□□ -1.3
PRPF40A-205ENST00000467114 NKRFO15226 690 aaKnown RBP eCLIP6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 LTFP02788 710 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 GNAT1P11488 350 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 GPR85P60893 370 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 SKIDA1Q1XH10 827 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 PHF19Q5T6S3 580 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 CD276Q5ZPR3 534 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 IFNL3Q8IZI9 196 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 SLC16A11Q8NCK7 471 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 AJUBAQ96IF1 538 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 WWC2-AS2Q96NR7 200 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 CCDC113Q9H0I3 377 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 KCND1Q9NSA2 647 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 SIRPGQ9P1W8 387 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 ZFP69BQ9UJL9 534 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 DSEQ9UL01 958 aa6.9□□□□□ -1.3
PRPF40A-205ENST00000467114 CNOT4O95628 575 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 ENO2P09104 434 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 R3HDM1Q15032 1099 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 LRP10Q7Z4F1 713 aa6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 DNAJC2Q99543 621 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 KCNJ15Q99712 375 aa6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 SEC61A2Q9H9S3 476 aa6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 SRRDQ9UH36 339 aa6.89□□□□□ -1.31
PRPF40A-205ENST00000467114 TRAV20A0A0B4J274 112 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 IGSF3O75054 1194 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 FBXO21O94952 628 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 FSHBP01225 129 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 SOD2P04179 222 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 C6P13671 934 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 TACR2P21452 398 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 PFKPQ01813 784 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 SOGA3Q5TF21 947 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 KCTD1Q719H9 257 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 ZNF669Q96BR6 464 aaPredicted RBP6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 DEF6Q9H4E7 631 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 ARHGAP20Q9P2F6 1191 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 SLC4A7Q9Y6M7 1214 aa6.88□□□□□ -1.31
PRPF40A-205ENST00000467114 FAM221BA6H8Z2 402 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 ZNF839A8K0R7 811 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 ACOT7O00154 380 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 CSF2RBP32927 897 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 SELENOPP49908 381 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 IFRD2Q12894 506 aaPredicted RBP6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 RASGRF1Q13972 1273 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 ZNF585AQ6P3V2 769 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 CRIP3Q6Q6R5 217 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 REXO1L1PQ8IX06 675 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 Q8N1X5 172 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 Q8TCH9 128 aa6.87□□□□□ -1.31
PRPF40A-205ENST00000467114 ASXL2Q76L83 1435 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms