RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ARHGAP4P98171 946 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 AAK1Q2M2I8 961 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 HEATR3Q7Z4Q2 680 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 MYOCDQ8IZQ8 938 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 GDPD5Q8WTR4 605 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 MTUS1Q9ULD2 1270 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 LINC01553A4QN01 128 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 ITGB5P18084 799 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 MKRN4PQ13434 485 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-206ENST00000466532 CENPQQ7L2Z9 268 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-206ENST00000466532 LMBR1Q8WVP7 490 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 SEPT8Q92599 483 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 NEK1Q96PY6 1258 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 TGS1Q96RS0 853 aaKnown RBP21.98■■□□□ 1.11
COL9A3-206ENST00000466532 UHRF1Q96T88 793 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-206ENST00000466532 PKD2L1Q9P0L9 805 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 PCDHA6Q9UN73 950 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 PCDHA8Q9Y5H6 950 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 XIRP2A4UGR9 3374 aa21.98■■□□□ 1.11
COL9A3-206ENST00000466532 MUC3AQ02505 3323 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 NCOR1O75376 2440 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 ERVK-21P61565 698 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 ADAM17P78536 824 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 MTMR1Q13613 665 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 APOA5Q6Q788 366 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 OSBPL7Q9BZF2 842 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 RBM28Q9NW13 759 aaKnown RBP21.97■■□□□ 1.11
COL9A3-206ENST00000466532 INSL6Q9Y581 213 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 UBIAD1Q9Y5Z9 338 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 CNTNAP5Q8WYK1 1306 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 NRCAMQ92823 1304 aa21.97■■□□□ 1.11
COL9A3-206ENST00000466532 SEPT1Q8WYJ6 367 aa21.96■■□□□ 1.11
COL9A3-206ENST00000466532 TCEANC2Q96MN5 208 aa21.96■■□□□ 1.11
COL9A3-206ENST00000466532 EHMT1Q9H9B1 1298 aa21.96■■□□□ 1.11
COL9A3-206ENST00000466532 SUGCTQ9HAC7 445 aa21.96■■□□□ 1.11
COL9A3-206ENST00000466532 COG5Q9UP83 839 aa21.96■■□□□ 1.11
COL9A3-206ENST00000466532 GSTTP1A0A1W2PQM5 241 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 BMP1P13497 986 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 KCNQ1P51787 676 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 WWC2Q6AWC2 1192 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 JADE2Q9NQC1 790 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 ERAP1Q9NZ08 941 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 LMCD1Q9NZU5 365 aa21.95■■□□□ 1.1
COL9A3-206ENST00000466532 ZBTB43O43298 467 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 MARK3P27448 753 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 NAPAP54920 295 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 HTRA4P83105 476 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-206ENST00000466532 EXOSC10Q01780 885 aaKnown RBP21.94■■□□□ 1.1
COL9A3-206ENST00000466532 RTN1Q16799 776 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 FAM26DQ5JW98 314 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 DHX32Q7L7V1 743 aaKnown RBP21.94■■□□□ 1.1
COL9A3-206ENST00000466532 GLG1Q92896 1179 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 ATG2AQ2TAZ0 1938 aa21.94■■□□□ 1.1
COL9A3-206ENST00000466532 MAFGO15525 162 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 MYH9P35579 1960 aaKnown RBP21.93■■□□□ 1.1
COL9A3-206ENST00000466532 PPFIA1Q13136 1202 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 ADCK5Q3MIX3 580 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 WDR81Q562E7 1941 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 TYW1BQ6NUM6 668 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 RUFY4Q6ZNE9 571 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 APBB2Q92870 758 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 HLA-CQ95604 372 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 NECAB3Q96P71 396 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-206ENST00000466532 C17orf80Q9BSJ5 609 aa21.93■■□□□ 1.1
COL9A3-206ENST00000466532 IFIH1Q9BYX4 1025 aaKnown RBP21.93■■□□□ 1.1
COL9A3-206ENST00000466532 BRWD1Q9NSI6 2320 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 COL4A6Q14031 1691 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 BDP1A6H8Y1 2624 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-206ENST00000466532 CDC45O75419 566 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 UPP2O95045 317 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 GRIK4Q16099 956 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 TSGA10IPQ3SY00 556 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 PPP1R18Q6NYC8 613 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 TAF2Q6P1X5 1199 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 FBXO22Q8NEZ5 403 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 SP7Q8TDD2 431 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-206ENST00000466532 TOP1MTQ969P6 601 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 YME1L1Q96TA2 773 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 SMARCAD1Q9H4L7 1026 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 RIC8AQ9NPQ8 531 aa21.92■■□□□ 1.1
COL9A3-206ENST00000466532 GOLGA8AA7E2F4 631 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 GOLGA8BA8MQT2 603 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 CHRNA1P02708 482 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 ADCY7P51828 1080 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 FUT2Q10981 343 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 KRT32Q14532 448 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 PGBD1Q96JS3 809 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 MXRA8Q9BRK3 442 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 JPH1Q9HDC5 661 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-206ENST00000466532 TUBE1Q9UJT0 475 aa21.91■■□□□ 1.1
COL9A3-206ENST00000466532 V9GY48 417 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-206ENST00000466532 EVPLQ92817 2033 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 KLF18A0A0U1RQI7 1052 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 hCG_1984214I3L0E3 225 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 RPAINQ86UA6 219 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 RSPH3Q86UC2 560 aa21.9■■□□□ 1.1
COL9A3-206ENST00000466532 TEX2Q8IWB9 1127 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms