RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 C7orf31Q8N865 590 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 SCLYQ96I15 445 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 GPR20Q99678 358 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 KCNH7Q9NS40 1196 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 LOXHD1Q8IVV2 1947 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
RTFDC1-205ENST00000466260 FAM86B1E9PN63 330 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 SOX1O00570 391 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 GTPBP6O43824 516 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 GABBR2O75899 941 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 F2P00734 622 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 FAM86B2P0C5J1 330 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 CSF2RAP15509 400 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 BMP8BP34820 402 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 TIE1P35590 1138 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 EPHB4P54760 987 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 ST3GAL1Q11201 340 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 SHHQ15465 462 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 CEP55Q53EZ4 464 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 NFRKBQ6P4R8 1299 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 EFCAB3Q8N7B9 438 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 GIMAP8Q8ND71 665 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 IL17RAQ96F46 866 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 KIF2CQ99661 725 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 SDF4Q9BRK5 362 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 TRIOBPQ9H2D6 2365 aa11.08□□□□□ -0.64
RTFDC1-205ENST00000466260 SIP14410 1827 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 H3BRB1 525 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 PPFIA4O75335 1185 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 SUPT20HL2P0C7V6 817 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 XBP1P17861 261 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 GUCY1B3Q02153 619 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 PRR16Q569H4 304 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 MFSD5Q6N075 450 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 DEFB128Q7Z7B8 93 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 TMEM199Q8N511 208 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 NSUN7Q8NE18 718 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 TBCKQ8TEA7 893 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 SENP7Q9BQF6 1050 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 WNT8AQ9H1J5 351 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 AGO4Q9HCK5 861 aaKnown RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 SLC9A2Q9UBY0 812 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 GTF2IRD1Q9UHL9 959 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 LIMCH1Q9UPQ0 1083 aa11.07□□□□□ -0.64
RTFDC1-205ENST00000466260 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 EVPLQ92817 2033 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 PTPRSQ13332 1948 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 GSTTP1A0A1W2PQM5 241 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 C17orf102A2RUQ5 167 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 HAS3O00219 553 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 TDP2O95551 362 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 ITGB3BPQ13352 177 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 PPIGQ13427 754 aaKnown RBP eCLIP11.06□□□□□ -0.646e-9■■□□□ 11.5
RTFDC1-205ENST00000466260 HIC1Q14526 733 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 INF2Q27J81 1249 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 TRMT1LQ7Z2T5 733 aaKnown RBP11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 SEPT1Q8WYJ6 367 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 WASF1Q92558 559 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 GLG1Q92896 1179 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 GJA10Q969M2 543 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.649e-7■□□□□ 10.7
RTFDC1-205ENST00000466260 ZNF577Q9BSK1 485 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 PHF20Q9BVI0 1012 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 TCEAL9Q9UHQ7 104 aa11.06□□□□□ -0.64
RTFDC1-205ENST00000466260 IGLV3-22A0A075B6J6 115 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 MEIS1O00470 390 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 MAFGO15525 162 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 CHMP2AO43633 222 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 CYP3A4P08684 503 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 SMIM10L2AP0DMW4 78 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 SMIM10L2BP0DMW5 78 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 HOXD8P13378 290 aaPredicted RBP11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 ACTR2P61160 394 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 IGBP1P78318 339 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 TRIM29Q14134 588 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 BECN1Q14457 450 aa11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 NONOQ15233 471 aaKnown RBP eCLIP11.05□□□□□ -0.64
RTFDC1-205ENST00000466260 RABEP1Q15276 862 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms