RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 H3BRB1 525 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 NOP56O00567 594 aaKnown RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 SORBS3O60504 671 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 GGPS1O95749 300 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 PARP1P09874 1014 aaKnown RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 DDIT3P35638 169 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 BMPR1AP36894 532 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 PTPN5P54829 565 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 ANTXR2P58335 489 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 EXOSC10Q01780 885 aaKnown RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 ST3GAL1Q11201 340 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 CUL4AQ13619 759 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 HSDL1Q3SXM5 330 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 SAMD3Q8N6K7 520 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 PNMA1Q8ND90 353 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 EDAQ92838 391 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 ZKSCAN3Q9BRR0 538 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 C16orf70Q9BSU1 422 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 AMNQ9BXJ7 453 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 VAT1LQ9HCJ6 419 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 MUTYHQ9UIF7 546 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 COL4A4P53420 1690 aaPredicted RBP9.89□□□□□ -0.83
DDR1-242ENST00000465966 MUC6Q6W4X9 2439 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 REV3LO60673 3130 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.88□□□□□ -0.83
DDR1-242ENST00000465966 STXBP3O00186 592 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 TREHO43280 583 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 MBTPS2O43462 519 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
DDR1-242ENST00000465966 CTSHP09668 335 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 CCND2P30279 289 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 LTBRP36941 435 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 HSD17B4P51659 736 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 TRAF1Q13077 416 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 SMAD4Q13485 552 aaKnown RBP9.88□□□□□ -0.83
DDR1-242ENST00000465966 HIC1Q14526 733 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 CLUL1Q15846 466 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 CTC1Q2NKJ3 1217 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 Q6ZUG5 572 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 DHX32Q7L7V1 743 aaKnown RBP9.88□□□□□ -0.83
DDR1-242ENST00000465966 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
DDR1-242ENST00000465966 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 PDCD2LQ9BRP1 358 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 AGXT2Q9BYV1 514 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 RNPEPQ9H4A4 650 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 IGFLR1Q9H665 355 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 CD207Q9UJ71 328 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 LIMCH1Q9UPQ0 1083 aa9.88□□□□□ -0.83
DDR1-242ENST00000465966 B4E1Z4 1266 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 PRC1O43663 620 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 UBA1P22314 1058 aaKnown RBP9.87□□□□□ -0.83
DDR1-242ENST00000465966 HOXC8P31273 242 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 NDUFV1P49821 464 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 HYAL1Q12794 435 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 PGM5Q15124 567 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 ME3Q16798 604 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 CYB5R4Q7L1T6 521 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 BMP8AQ7Z5Y6 402 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 RALYLQ86SE5 291 aaKnown RBP9.87□□□□□ -0.83
DDR1-242ENST00000465966 NCOA7Q8NI08 942 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
DDR1-242ENST00000465966 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 JMJD4Q9H9V9 463 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 ZNF215Q9UL58 517 aaPredicted RBP9.87□□□□□ -0.83
DDR1-242ENST00000465966 PCDHA1Q9Y5I3 950 aa9.87□□□□□ -0.83
DDR1-242ENST00000465966 LCTP09848 1927 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 GCOM1H8Y6P7 765 aaPredicted RBP9.86□□□□□ -0.83
DDR1-242ENST00000465966 GRM6O15303 877 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 KDM4AO75164 1064 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 RGS20O76081 388 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 LGALS2P05162 132 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 HSP90AA1P07900 732 aaKnown RBP9.86□□□□□ -0.83
DDR1-242ENST00000465966 POLR2MP0CAP2 368 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 SP2Q02086 613 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 GHRHRQ02643 423 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 DLX2Q07687 328 aaPredicted RBP9.86□□□□□ -0.83
DDR1-242ENST00000465966 BTG3Q14201 252 aaPredicted RBP9.86□□□□□ -0.83
DDR1-242ENST00000465966 NEDD9Q14511 834 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 ANKRD1Q15327 319 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 GNPTABQ3T906 1256 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 ANKS1AQ92625 1134 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 BRF1Q92994 677 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 IRF2BPLQ9H1B7 796 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 SETD4Q9NVD3 440 aa9.86□□□□□ -0.83
DDR1-242ENST00000465966 ADGRA3Q8IWK6 1321 aa9.85□□□□□ -0.83
DDR1-242ENST00000465966 TET1Q8NFU7 2136 aa9.85□□□□□ -0.83
DDR1-242ENST00000465966 TMEM221A6NGB7 291 aa9.85□□□□□ -0.83
DDR1-242ENST00000465966 M0R296 226 aa9.85□□□□□ -0.83
DDR1-242ENST00000465966 SH2B2O14492 632 aaPredicted RBP9.85□□□□□ -0.83
DDR1-242ENST00000465966 ZBTB5O15062 677 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms