RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 GJD3Q8N144 294 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 APBB2Q92870 758 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 YME1L1Q96TA2 773 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
COL11A1-207ENST00000465209 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-207ENST00000465209 USP34Q70CQ2 3546 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 KCNA2P16389 499 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 CHMLP26374 656 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 LTBRP36941 435 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 TRDNQ13061 729 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 GPM6BQ13491 265 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 USP17L6PQ6QN14 398 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 RUFY4Q6ZNE9 571 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 BANK1Q8NDB2 785 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 PABPC5Q96DU9 382 aaKnown RBP12.63□□□□□ -0.39
COL11A1-207ENST00000465209 MAP3K14Q99558 947 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
COL11A1-207ENST00000465209 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
COL11A1-207ENST00000465209 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 MBLAC1A4D2B0 266 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 H3BQ06 376 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 SGSM2O43147 1006 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 ATP9AO75110 1047 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 UPP2O95045 317 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 ARHGAP4P98171 946 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 PTPROQ16827 1216 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 CTC1Q2NKJ3 1217 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 LINC01599Q8WXQ3 324 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 ZNF689Q96CS4 500 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 ZNF215Q9UL58 517 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-207ENST00000465209 ADGRA3Q8IWK6 1321 aa12.62□□□□□ -0.39
COL11A1-207ENST00000465209 GSTTP1A0A1W2PQM5 241 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 DDAH1O94760 285 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 GHRP10912 638 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 GNAT1P11488 350 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 ITGB5P18084 799 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 SMARCA1P28370 1054 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-207ENST00000465209 ZP2Q05996 745 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 LPIN1Q14693 890 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 PUS10Q3MIT2 529 aaKnown RBP12.61□□□□□ -0.39
COL11A1-207ENST00000465209 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 MAP4K1Q92918 833 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 GPRASP2Q96D09 838 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 PLXNA4Q9HCM2 1894 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
COL11A1-207ENST00000465209 ERICH2A1L162 156 aa12.6□□□□□ -0.39
COL11A1-207ENST00000465209 SP4Q02446 784 aa12.6□□□□□ -0.39
COL11A1-207ENST00000465209 CAMK1Q14012 370 aa12.6□□□□□ -0.39
COL11A1-207ENST00000465209 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
COL11A1-207ENST00000465209 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
COL11A1-207ENST00000465209 TAF2Q6P1X5 1199 aa12.6□□□□□ -0.39
COL11A1-207ENST00000465209 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
COL11A1-207ENST00000465209 SRBD1Q8N5C6 995 aaKnown RBP12.6□□□□□ -0.39
COL11A1-207ENST00000465209 DMDP11532 3685 aa12.6□□□□□ -0.39
COL11A1-207ENST00000465209 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-207ENST00000465209 TECTAO75443 2155 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-207ENST00000465209 GRM6O15303 877 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 CTNNB1P35222 781 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 BMPR1AP36894 532 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-207ENST00000465209 HYAL1Q12794 435 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 GRIK4Q16099 956 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 FBXO47Q5MNV8 452 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 SMARCC2Q8TAQ2 1214 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
COL11A1-207ENST00000465209 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 PCYT2Q99447 389 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 AGO3Q9H9G7 860 aaKnown RBP12.59□□□□□ -0.39
COL11A1-207ENST00000465209 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 TUBE1Q9UJT0 475 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
COL11A1-207ENST00000465209 ENPP3O14638 875 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 TBX10O75333 385 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 RB1P06400 928 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-207ENST00000465209 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 TSHZ1Q6ZSZ6 1077 aa12.58□□□□□ -0.4
COL11A1-207ENST00000465209 NLRX1Q86UT6 975 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms