RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 CUL5Q93034 780 aa26.7■■□□□ 1.86
SSNA1-203ENST00000463511 RRP36Q96EU6 259 aaKnown RBP26.7■■□□□ 1.86
SSNA1-203ENST00000463511 SAMD11Q96NU1 681 aa26.7■■□□□ 1.86
SSNA1-203ENST00000463511 SPZ1Q9BXG8 430 aa26.7■■□□□ 1.86
SSNA1-203ENST00000463511 LSG1Q9H089 658 aaKnown RBP26.7■■□□□ 1.86
SSNA1-203ENST00000463511 CTCFLQ8NI51 663 aaPredicted RBP26.69■■□□□ 1.86
SSNA1-203ENST00000463511 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.69■■□□□ 1.86
SSNA1-203ENST00000463511 MAP4K1Q92918 833 aa26.69■■□□□ 1.86
SSNA1-203ENST00000463511 IFIH1Q9BYX4 1025 aaKnown RBP26.69■■□□□ 1.86
SSNA1-203ENST00000463511 LY9Q9HBG7 655 aa26.69■■□□□ 1.86
SSNA1-203ENST00000463511 KIAA1671Q9BY89 1806 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 MEIS2O14770 477 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 ADAM17P78536 824 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 PTPROQ16827 1216 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 APBB2Q92870 758 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 SENP7Q9BQF6 1050 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 C11orf16Q9NQ32 467 aa26.68■■□□□ 1.86
SSNA1-203ENST00000463511 SEC63Q9UGP8 760 aaKnown RBP26.68■■□□□ 1.86
SSNA1-203ENST00000463511 FAM86C2PA6NEL3 165 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 PIK3CDO00329 1044 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 DDAH1O94760 285 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 IL9P15248 144 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 KIF5BP33176 963 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 GPM6BQ13491 265 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 TIGD5Q53EQ6 642 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 TMEM192Q8IY95 271 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 MAP3K14Q99558 947 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 HCN4Q9Y3Q4 1203 aa26.67■■□□□ 1.86
SSNA1-203ENST00000463511 H3BNC9 293 aa26.66■■□□□ 1.86
SSNA1-203ENST00000463511 FAM26DQ5JW98 314 aa26.66■■□□□ 1.86
SSNA1-203ENST00000463511 PTCRAQ6ISU1 281 aaPredicted RBP26.66■■□□□ 1.86
SSNA1-203ENST00000463511 XRRA1Q6P2D8 792 aa26.66■■□□□ 1.86
SSNA1-203ENST00000463511 NLRX1Q86UT6 975 aa26.66■■□□□ 1.86
SSNA1-203ENST00000463511 FAM178BQ8IXR5 827 aa26.66■■□□□ 1.86
SSNA1-203ENST00000463511 RBM8AQ9Y5S9 174 aaKnown RBP26.66■■□□□ 1.86
SSNA1-203ENST00000463511 NRCAMQ92823 1304 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 TTC3P53804 2025 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 PLEKHA8P1O95397 391 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 TCF7P36402 384 aaPredicted RBP26.65■■□□□ 1.86
SSNA1-203ENST00000463511 RUFY4Q6ZNE9 571 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 BANK1Q8NDB2 785 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 ANO2Q9NQ90 1003 aa26.65■■□□□ 1.86
SSNA1-203ENST00000463511 H3BQ06 376 aaPredicted RBP26.64■■□□□ 1.86
SSNA1-203ENST00000463511 GPR37L1O60883 481 aa26.64■■□□□ 1.86
SSNA1-203ENST00000463511 CHRNA1P02708 482 aa26.64■■□□□ 1.86
SSNA1-203ENST00000463511 GHRP10912 638 aa26.64■■□□□ 1.86
SSNA1-203ENST00000463511 CMTR1Q8N1G2 835 aaKnown RBP26.64■■□□□ 1.86
SSNA1-203ENST00000463511 GIMAP8Q8ND71 665 aaPredicted RBP26.64■■□□□ 1.86
SSNA1-203ENST00000463511 PI4K2BG5E9Z4 385 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 PRC1O43663 620 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 ATP9AO75110 1047 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 KCNA2P16389 499 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 MARK3P27448 753 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 SMARCA1P28370 1054 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 TCEAL5Q5H9L2 206 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 GJD3Q8N144 294 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 SRBD1Q8N5C6 995 aaKnown RBP26.63■■□□□ 1.85
SSNA1-203ENST00000463511 NEK9Q8TD19 979 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 GPRASP2Q96D09 838 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 LZTS2Q9BRK4 669 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 PKD2L1Q9P0L9 805 aa26.63■■□□□ 1.85
SSNA1-203ENST00000463511 C5orf42Q9H799 3197 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 GRXCR2A6NFK2 248 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 RXRAP19793 462 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 SSTR3P32745 418 aaPredicted RBP26.62■■□□□ 1.85
SSNA1-203ENST00000463511 PPFIA1Q13136 1202 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 NFXL1Q6ZNB6 911 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 EP400NLQ6ZTU2 488 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 IL17RAQ96F46 866 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 PSTPIP2Q9H939 334 aa26.62■■□□□ 1.85
SSNA1-203ENST00000463511 CTNNB1P35222 781 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 GNAQP50148 359 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 COL9A3Q14050 684 aaPredicted RBP26.61■■□□□ 1.85
SSNA1-203ENST00000463511 UBE2SQ16763 222 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 TAF2Q6P1X5 1199 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 FIBCD1Q8N539 461 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 CDHR1Q96JP9 859 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 NSUN3Q9H649 340 aaKnown RBP26.61■■□□□ 1.85
SSNA1-203ENST00000463511 EHMT1Q9H9B1 1298 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 TUBE1Q9UJT0 475 aa26.61■■□□□ 1.85
SSNA1-203ENST00000463511 GSTTP1A0A1W2PQM5 241 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 hCG_1642624A0A1W2PR95 340 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 CCDC69A6NI79 296 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 SH2B2O14492 632 aaPredicted RBP26.6■■□□□ 1.85
SSNA1-203ENST00000463511 ITGB5P18084 799 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 MGAT3Q09327 533 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 LPIN1Q14693 890 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 NECTIN1Q15223 517 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 GRIK4Q16099 956 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 RPAINQ86UA6 219 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 SEPT1Q8WYJ6 367 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 PABPC5Q96DU9 382 aaKnown RBP26.6■■□□□ 1.85
SSNA1-203ENST00000463511 ERAP1Q9NZ08 941 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 ADGRA3Q8IWK6 1321 aa26.6■■□□□ 1.85
SSNA1-203ENST00000463511 MCM5P33992 734 aa26.59■■□□□ 1.85
SSNA1-203ENST00000463511 MTMR1Q13613 665 aa26.59■■□□□ 1.85
SSNA1-203ENST00000463511 PUS10Q3MIT2 529 aaKnown RBP26.59■■□□□ 1.85
SSNA1-203ENST00000463511 RSPH3Q86UC2 560 aa26.59■■□□□ 1.85
SSNA1-203ENST00000463511 RAB11FIP4Q86YS3 637 aa26.59■■□□□ 1.85
SSNA1-203ENST00000463511 DNAJB3Q8WWF6 145 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms