RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 PRR16Q569H4 304 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC12Q8WUD4 166 aaPredicted RBP9.82□□□□□ -0.84
TMEM254-208ENST00000463209 CRYGNQ8WXF5 182 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 GTF3C6Q969F1 213 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 IL17RAQ96F46 866 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 PCYT2Q99447 389 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 KATNAL1Q9BW62 490 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 IL23AQ9NPF7 189 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 SIP14410 1827 aa9.82□□□□□ -0.84
TMEM254-208ENST00000463209 ZBBXA8MT70 800 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 MEIS1O00470 390 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 TREHO43280 583 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 TDP2O95551 362 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 CTSHP09668 335 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 IQCF3P0C7M6 154 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 GNA11P29992 359 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 ACTR2P61160 394 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 IGBP1P78318 339 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 PTPN11Q06124 597 aaPredicted RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 GPNMBQ14956 572 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 TRIM71Q2Q1W2 868 aaKnown RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 CPLX2Q6PUV4 134 aaKnown RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 RUFY4Q6ZNE9 571 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 TMCO2Q7Z6W1 182 aaPredicted RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 SESTD1Q86VW0 696 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC83Q8IWF9 413 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 BLIDQ8IZY5 108 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 DEFB123Q8N688 67 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 LMBR1Q8WVP7 490 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 TRAPPC12Q8WVT3 735 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 GLG1Q92896 1179 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 CDHR1Q96JP9 859 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 SENP7Q9BQF6 1050 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 SDF4Q9BRK5 362 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 ZNF577Q9BSK1 485 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 C22orf23Q9BZE7 217 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 OSBPL7Q9BZF2 842 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 GLT8D2Q9H1C3 349 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 ORC3Q9UBD5 711 aaPredicted RBP9.81□□□□□ -0.84
TMEM254-208ENST00000463209 SLC9A2Q9UBY0 812 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 PCDHA4Q9UN74 947 aa9.81□□□□□ -0.84
TMEM254-208ENST00000463209 CDKL5O76039 1030 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 FGBP02675 491 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 CKBP12277 381 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 THPOP40225 353 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 RABGGTBP53611 331 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 INF2Q27J81 1249 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 EARS2Q5JPH6 523 aaKnown RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 ZNF618Q5T7W0 954 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 PSRC1Q6PGN9 363 aaPredicted RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 LRRC8DQ7L1W4 858 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 RETREG2Q8NC44 543 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 GIMAP8Q8ND71 665 aaPredicted RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 BICD2Q8TD16 824 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 TBCKQ8TEA7 893 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 LENG9Q96B70 501 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 PHF20Q9BVI0 1012 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 SEZ6LQ9BYH1 1024 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 FTOQ9C0B1 505 aaKnown RBP eCLIP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 SH3GLB2Q9NR46 395 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 ZNF215Q9UL58 517 aaPredicted RBP9.8□□□□□ -0.84
TMEM254-208ENST00000463209 STK36Q9NRP7 1315 aa9.8□□□□□ -0.84
TMEM254-208ENST00000463209 M0R2N6 131 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 IPO5O00410 1097 aaKnown RBP9.79□□□□□ -0.84
TMEM254-208ENST00000463209 BACH1O14867 736 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 MSH4O15457 936 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
TMEM254-208ENST00000463209 CHMP2AO43633 222 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 NBNO60934 754 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 CYP3A4P08684 503 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 MYOGP15173 224 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 SELPP16109 830 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 GUCY1B3Q02153 619 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 PPFIA1Q13136 1202 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 NR5A1Q13285 461 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 PTK7Q13308 1070 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 BFSP2Q13515 415 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 GRIK4Q16099 956 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 SERINC5Q86VE9 423 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 CCDC60Q8IWA6 550 aaPredicted RBP9.79□□□□□ -0.84
TMEM254-208ENST00000463209 TTYH1Q9H313 450 aaPredicted RBP9.79□□□□□ -0.84
TMEM254-208ENST00000463209 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 NFASCO94856 1347 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 EMSYQ7Z589 1322 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 TET1Q8NFU7 2136 aa9.79□□□□□ -0.84
TMEM254-208ENST00000463209 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 SLC37A4O43826 429 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 LGR5O75473 907 aa9.78□□□□□ -0.84
TMEM254-208ENST00000463209 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms