RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 COL4A6Q14031 1691 aa21.55■■□□□ 1.04
COL20A1-204ENST00000455906 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.54■■□□□ 1.04
COL20A1-204ENST00000455906 ITGB5P18084 799 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 ARHGAP4P98171 946 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 FAM26DQ5JW98 314 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 RAB11FIP4Q86YS3 637 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 GIMAP8Q8ND71 665 aaPredicted RBP21.54■■□□□ 1.04
COL20A1-204ENST00000455906 TOP1MTQ969P6 601 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 GPRASP2Q96D09 838 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 ESYT1Q9BSJ8 1104 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 PSTPIP2Q9H939 334 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 RAPGEFL1Q9UHV5 662 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 NLRC5Q86WI3 1866 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 NRCAMQ92823 1304 aa21.54■■□□□ 1.04
COL20A1-204ENST00000455906 hCG_1642624A0A1W2PR95 340 aa21.53■■□□□ 1.04
COL20A1-204ENST00000455906 TCF7P36402 384 aaPredicted RBP21.53■■□□□ 1.04
COL20A1-204ENST00000455906 UBE2SQ16763 222 aa21.53■■□□□ 1.04
COL20A1-204ENST00000455906 CREB3L3Q68CJ9 461 aa21.53■■□□□ 1.04
COL20A1-204ENST00000455906 FBXO22Q8NEZ5 403 aa21.53■■□□□ 1.04
COL20A1-204ENST00000455906 GSTTP1A0A1W2PQM5 241 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 CALM1P0DP23 149 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 CALM2P0DP24 149 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 CALM3P0DP25 149 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 TMTC3Q6ZXV5 915 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 RPAINQ86UA6 219 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 CDHR1Q96JP9 859 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 LRRC2Q9BYS8 371 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 UBIAD1Q9Y5Z9 338 aa21.52■■□□□ 1.04
COL20A1-204ENST00000455906 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-204ENST00000455906 CHRNA1P02708 482 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 EPC2Q52LR7 807 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 RUFY4Q6ZNE9 571 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 SGMS1Q86VZ5 419 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 CCDC82Q8N4S0 544 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 FANCBQ8NB91 859 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 APBB2Q92870 758 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 YME1L1Q96TA2 773 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 IFIH1Q9BYX4 1025 aaKnown RBP21.51■■□□□ 1.03
COL20A1-204ENST00000455906 UBE2ZQ9H832 354 aaPredicted RBP21.51■■□□□ 1.03
COL20A1-204ENST00000455906 SLC12A7Q9Y666 1083 aa21.51■■□□□ 1.03
COL20A1-204ENST00000455906 RALGAPA2Q2PPJ7 1873 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 UPP2O95045 317 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 MGAT3Q09327 533 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 SEPT1Q8WYJ6 367 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 SAMD11Q96NU1 681 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
COL20A1-204ENST00000455906 MYO7AQ13402 2215 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 PPFIA1Q13136 1202 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 MTMR1Q13613 665 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 TAF2Q6P1X5 1199 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 MICU3Q86XE3 530 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 MRPL38Q96DV4 380 aaKnown RBP21.49■■□□□ 1.03
COL20A1-204ENST00000455906 C1QTNF1Q9BXJ1 281 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 EHMT1Q9H9B1 1298 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 JADE2Q9NQC1 790 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 ERAP1Q9NZ08 941 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 PKD2L1Q9P0L9 805 aa21.49■■□□□ 1.03
COL20A1-204ENST00000455906 MBLAC1A4D2B0 266 aaPredicted RBP21.48■■□□□ 1.03
COL20A1-204ENST00000455906 SPDYE3A6NKU9 549 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 GHRP10912 638 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 MARK3P27448 753 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 GRIK4Q16099 956 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 MARCH8Q5T0T0 291 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 HEATR3Q7Z4Q2 680 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 EPHX3Q9H6B9 360 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
COL20A1-204ENST00000455906 ATG2AQ2TAZ0 1938 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 H3BNC9 293 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 MAFGO15525 162 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 LPIN1Q14693 890 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 TMEM192Q8IY95 271 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 KHSRPQ92945 711 aaKnown RBP eCLIP21.47■■□□□ 1.03
COL20A1-204ENST00000455906 PCYT2Q99447 389 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 TUBE1Q9UJT0 475 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 CNTNAP5Q8WYK1 1306 aa21.47■■□□□ 1.03
COL20A1-204ENST00000455906 TTC3P53804 2025 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 KCNA5P22460 613 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 GPM6BQ13491 265 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 LEXMQ3ZCV2 418 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 WWC2Q6AWC2 1192 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.46■■□□□ 1.03
COL20A1-204ENST00000455906 DNAJB3Q8WWF6 145 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 GLG1Q92896 1179 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 SMARCAD1Q9H4L7 1026 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 CD320Q9NPF0 282 aa21.46■■□□□ 1.03
COL20A1-204ENST00000455906 LINC00271P0C7V0 271 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 FUT2Q10981 343 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 PTPROQ16827 1216 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 FBXO47Q5MNV8 452 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 APOA5Q6Q788 366 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 CYP2W1Q8TAV3 490 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 ZBTB10Q96DT7 871 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 RC3H2Q9HBD1 1191 aaKnown RBP21.45■■□□□ 1.02
COL20A1-204ENST00000455906 JPH1Q9HDC5 661 aaPredicted RBP21.45■■□□□ 1.02
COL20A1-204ENST00000455906 KCNH7Q9NS40 1196 aa21.45■■□□□ 1.02
COL20A1-204ENST00000455906 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
COL20A1-204ENST00000455906 TIGD5Q53EQ6 642 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms