RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 GNAT1P11488 350 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 PTK7Q13308 1070 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-214ENST00000455548 RABEP1Q15276 862 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 NPY5RQ15761 445 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-214ENST00000455548 KRT25Q7Z3Z0 450 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 TRIM50Q86XT4 487 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 RPUSD2Q8IZ73 545 aaKnown RBP18.47■□□□□ 0.55
SMPD4-214ENST00000455548 TBCKQ8TEA7 893 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
SMPD4-214ENST00000455548 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 SMARCAD1Q9H4L7 1026 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 TBC1D22BQ9NU19 505 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 KCNJ14Q9UNX9 436 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 EMSYQ7Z589 1322 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-214ENST00000455548 HOXC8P31273 242 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 RFC2P35250 354 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 ACTR2P61160 394 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 RBL2Q08999 1139 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 NONOQ15233 471 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMPD4-214ENST00000455548 PRR16Q569H4 304 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 GLG1Q92896 1179 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 SCLYQ96I15 445 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.555e-7■■■□□ 16.3
SMPD4-214ENST00000455548 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 SH2B1Q9NRF2 756 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-214ENST00000455548 ERAP1Q9NZ08 941 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 TCEAL9Q9UHQ7 104 aa18.46■□□□□ 0.55
SMPD4-214ENST00000455548 CCDC194A0A1B0GVG4 234 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 LGR5O75473 907 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 PFKMP08237 780 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
SMPD4-214ENST00000455548 GPR153Q6NV75 609 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 ATP6V0A1Q93050 837 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 MTIF3Q9H2K0 278 aaKnown RBP18.45■□□□□ 0.54
SMPD4-214ENST00000455548 RNPEPQ9H4A4 650 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 BRMS1Q9HCU9 246 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 SCN5AQ14524 2016 aa18.45■□□□□ 0.54
SMPD4-214ENST00000455548 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
SMPD4-214ENST00000455548 DTNBO60941 627 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 ATG7O95352 703 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
SMPD4-214ENST00000455548 FGBP02675 491 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 ACRP10323 421 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 ZNF200P98182 395 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-214ENST00000455548 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 SERINC5Q86VE9 423 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 DHX38Q92620 1227 aaKnown RBP18.44■□□□□ 0.54
SMPD4-214ENST00000455548 LENG9Q96B70 501 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
SMPD4-214ENST00000455548 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
SMPD4-214ENST00000455548 MYH9P35579 1960 aaKnown RBP18.43■□□□□ 0.54
SMPD4-214ENST00000455548 CYP3A7-CYP3A51PA0A087WV96 503 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 DDX39AO00148 427 aaKnown RBP18.43■□□□□ 0.54
SMPD4-214ENST00000455548 ST18O60284 1047 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 JAK2O60674 1132 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 SELPP16109 830 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 CYP3A7P24462 503 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 TRIM29Q14134 588 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 ZNF746Q6NUN9 644 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-214ENST00000455548 MOXD1Q6UVY6 613 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 CCDC83Q8IWF9 413 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 TNPO1Q92973 898 aaKnown RBP18.43■□□□□ 0.54
SMPD4-214ENST00000455548 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
SMPD4-214ENST00000455548 EDIL3O43854 480 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 CCNE2O96020 404 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 CKBP12277 381 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 SLC26A2P50443 739 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 STAT5BP51692 787 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 KRT76Q01546 638 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 HIC1Q14526 733 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 INF2Q27J81 1249 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 TRIM71Q2Q1W2 868 aaKnown RBP18.42■□□□□ 0.54
SMPD4-214ENST00000455548 Q4G0T1 1027 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 ABHD15Q6UXT9 468 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 LRRC8DQ7L1W4 858 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 PCYT2Q99447 389 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 GJB4Q9NTQ9 266 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 SZT2Q5T011 3432 aa18.42■□□□□ 0.54
SMPD4-214ENST00000455548 IGKV6D-21A0A0A0MT36 114 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 BACH1O14867 736 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 TREHO43280 583 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 SLC34A2O95436 690 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 GCFC2P16383 781 aaKnown RBP18.41■□□□□ 0.54
SMPD4-214ENST00000455548 MARK3P27448 753 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 KRT2P35908 639 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms