RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C17orf80Q9BSJ5 609 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 USP26Q9BXU7 913 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 ANO2Q9NQ90 1003 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 MTUS1Q9ULD2 1270 aa18.47■□□□□ 0.55
GPC1-206ENST00000455111 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 RALGAPA2Q2PPJ7 1873 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 FAM26DQ5JW98 314 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 MARCH8Q5T0T0 291 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 MICU3Q86XE3 530 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 CYP2W1Q8TAV3 490 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 PGBD1Q96JS3 809 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
GPC1-206ENST00000455111 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
GPC1-206ENST00000455111 CHRNA1P02708 482 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 LINC00271P0C7V0 271 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 TCF7P36402 384 aaPredicted RBP18.45■□□□□ 0.54
GPC1-206ENST00000455111 GNAQP50148 359 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 MGAT3Q09327 533 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 XRRA1Q6P2D8 792 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 APOA5Q6Q788 366 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 UHRF1Q96T88 793 aaPredicted RBP18.45■□□□□ 0.54
GPC1-206ENST00000455111 PKD2L1Q9P0L9 805 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
GPC1-206ENST00000455111 PCDHA6Q9UN73 950 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 PCDHA8Q9Y5H6 950 aa18.45■□□□□ 0.54
GPC1-206ENST00000455111 TMTC2Q8N394 836 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 CUL5Q93034 780 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 ZBED2Q9BTP6 218 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 JADE2Q9NQC1 790 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 RAPGEFL1Q9UHV5 662 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 SLC12A7Q9Y666 1083 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 EMSYQ7Z589 1322 aa18.44■□□□□ 0.54
GPC1-206ENST00000455111 CALM1P0DP23 149 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 CALM2P0DP24 149 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 CALM3P0DP25 149 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 CPA1P15085 419 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 CDC27P30260 824 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 ARHGAP4P98171 946 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 NLRX1Q86UT6 975 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 TOP1MTQ969P6 601 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 TGS1Q96RS0 853 aaKnown RBP18.43■□□□□ 0.54
GPC1-206ENST00000455111 EHMT1Q9H9B1 1298 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 TMEM260Q9NX78 707 aa18.43■□□□□ 0.54
GPC1-206ENST00000455111 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
GPC1-206ENST00000455111 STXBP3O00186 592 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 GTPBP6O43824 516 aaPredicted RBP18.42■□□□□ 0.54
GPC1-206ENST00000455111 EFCAB14O75071 495 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 ARP10275 920 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 MARK3P27448 753 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 SKIV2LQ15477 1246 aaKnown RBP18.42■□□□□ 0.54
GPC1-206ENST00000455111 TSGA10IPQ3SY00 556 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 HEATR3Q7Z4Q2 680 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 LINC01599Q8WXQ3 324 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 KHSRPQ92945 711 aaKnown RBP eCLIP18.42■□□□□ 0.54
GPC1-206ENST00000455111 WDR81Q562E7 1941 aa18.42■□□□□ 0.54
GPC1-206ENST00000455111 CAND2O75155 1236 aa18.41■□□□□ 0.54
GPC1-206ENST00000455111 CLK2P49760 499 aaKnown RBP18.41■□□□□ 0.54
GPC1-206ENST00000455111 ITGB3BPQ13352 177 aaPredicted RBP18.41■□□□□ 0.54
GPC1-206ENST00000455111 MTMR1Q13613 665 aa18.41■□□□□ 0.54
GPC1-206ENST00000455111 RPAINQ86UA6 219 aa18.41■□□□□ 0.54
GPC1-206ENST00000455111 SEPT1Q8WYJ6 367 aa18.41■□□□□ 0.54
GPC1-206ENST00000455111 RC3H2Q9HBD1 1191 aaKnown RBP18.41■□□□□ 0.54
GPC1-206ENST00000455111 BDP1A6H8Y1 2624 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 AMHP03971 560 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 LPIN1Q14693 890 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 GRIK4Q16099 956 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 SEPT8Q92599 483 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 KCNB2Q92953 911 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 MXRA8Q9BRK3 442 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 CD320Q9NPF0 282 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 LMCD1Q9NZU5 365 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 ZNF215Q9UL58 517 aaPredicted RBP18.4■□□□□ 0.54
GPC1-206ENST00000455111 INSL6Q9Y581 213 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 NRCAMQ92823 1304 aa18.4■□□□□ 0.54
GPC1-206ENST00000455111 BRWD1Q9NSI6 2320 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
GPC1-206ENST00000455111 UPP2O95045 317 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 GHRP10912 638 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
GPC1-206ENST00000455111 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 DNAJB3Q8WWF6 145 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 CRYGNQ8WXF5 182 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 AGO3Q9H9G7 860 aaKnown RBP18.39■□□□□ 0.53
GPC1-206ENST00000455111 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 KCNH7Q9NS40 1196 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 V9GY48 417 aaPredicted RBP18.39■□□□□ 0.53
GPC1-206ENST00000455111 TTC3P53804 2025 aa18.39■□□□□ 0.53
GPC1-206ENST00000455111 CCNE2O96020 404 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 RTN1Q16799 776 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 EPC2Q52LR7 807 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 CENPQQ7L2Z9 268 aaPredicted RBP18.38■□□□□ 0.53
GPC1-206ENST00000455111 RTN4RL1Q86UN2 441 aaPredicted RBP18.38■□□□□ 0.53
GPC1-206ENST00000455111 CRIPAKQ8N1N5 446 aa18.38■□□□□ 0.53
GPC1-206ENST00000455111 GIMAP8Q8ND71 665 aaPredicted RBP18.38■□□□□ 0.53
GPC1-206ENST00000455111 HLA-CQ95604 372 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms