RNA–Protein interactions for RNA: ENST00000454906.6

EXTL3-202, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-202ENST00000454906 TRAPPC12Q8WVT3 735 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 WNT8BQ93098 351 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
EXTL3-202ENST00000454906 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
EXTL3-202ENST00000454906 MAF1Q9H063 256 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 AGO4Q9HCK5 861 aaKnown RBP10.04□□□□□ -0.8
EXTL3-202ENST00000454906 JPH1Q9HDC5 661 aaPredicted RBP10.04□□□□□ -0.8
EXTL3-202ENST00000454906 SLC9A2Q9UBY0 812 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 LIMCH1Q9UPQ0 1083 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
EXTL3-202ENST00000454906 H3BRB1 525 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 BACH1O14867 736 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 KPNA6O60684 536 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 F2P00734 622 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 TIMP1P01033 207 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 IBSPP21815 317 aaPredicted RBP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 FXR1P51114 621 aaKnown RBP eCLIP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 ACTR2P61160 394 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 NPY5RQ15761 445 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 LETM2Q2VYF4 491 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 Q7L0L9 218 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 OTOP2Q7RTS6 562 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 DHX38Q92620 1227 aaKnown RBP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 EMID1Q96A84 441 aaPredicted RBP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 TMX3Q96JJ7 454 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 TOX2Q96NM4 488 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 PPP1R16BQ96T49 567 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 ZNF577Q9BSK1 485 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 KATNAL1Q9BW62 490 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 PRO3102Q9H379 93 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 TUT1Q9H6E5 874 aaKnown RBP10.03□□□□□ -0.8
EXTL3-202ENST00000454906 FOXD4L1Q9NU39 408 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 SETD4Q9NVD3 440 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 GTF2IRD1Q9UHL9 959 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 SAMM50Q9Y512 469 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
EXTL3-202ENST00000454906 IGLV3-22A0A075B6J6 115 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 GSTTP1A0A1W2PQM5 241 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 GRXCR1A8MXD5 290 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 TREHO43280 583 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 SLC37A4O43826 429 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 CCNE2O96020 404 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 TGFB3P10600 412 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 XBP1P17861 261 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 KRT2P35908 639 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 TRIM29Q14134 588 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
EXTL3-202ENST00000454906 KRT40Q6A162 431 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 XRRA1Q6P2D8 792 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 NFRKBQ6P4R8 1299 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 ZNF365Q70YC5 407 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 HSCBQ8IWL3 235 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 TMEM199Q8N511 208 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 CDHR1Q96JP9 859 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
EXTL3-202ENST00000454906 FAM49AQ9H0Q0 323 aaPredicted RBP10.02□□□□□ -0.81
EXTL3-202ENST00000454906 SH3GLB2Q9NR46 395 aa10.02□□□□□ -0.81
EXTL3-202ENST00000454906 ZNF215Q9UL58 517 aaPredicted RBP10.02□□□□□ -0.81
EXTL3-202ENST00000454906 IPO5O00410 1097 aaKnown RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 CCNT1O60563 726 aaKnown RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 PPFIA4O75335 1185 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 THPOP40225 353 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 SETQ01105 290 aaPredicted RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 TMEM62Q0P6H9 643 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 PPFIA1Q13136 1202 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 PPIGQ13427 754 aaKnown RBP eCLIP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 CUL4AQ13619 759 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 FAM109BQ6ICB4 259 aaPredicted RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 MFSD5Q6N075 450 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 RUFY4Q6ZNE9 571 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 POTEDQ86YR6 584 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 CCDC60Q8IWA6 550 aaPredicted RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 FAM184AQ8NB25 1140 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 SPRYD3Q8NCJ5 442 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 GIMAP8Q8ND71 665 aaPredicted RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 LMBR1Q8WVP7 490 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 SEPT1Q8WYJ6 367 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 WASF1Q92558 559 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 CTAGE1Q96RT6 745 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 PCYT2Q99447 389 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 RNPEPQ9H4A4 650 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 AZI2Q9H6S1 392 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 BRMS1Q9HCU9 246 aa10.01□□□□□ -0.81
EXTL3-202ENST00000454906 DDX25Q9UHL0 483 aaKnown RBP10.01□□□□□ -0.81
EXTL3-202ENST00000454906 TCHHQ07283 1943 aa10□□□□□ -0.81
EXTL3-202ENST00000454906 BTBD18B2RXH4 712 aa10□□□□□ -0.81
EXTL3-202ENST00000454906 HAS3O00219 553 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms