RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 PTPN21Q16825 1174 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 STOX1Q6ZVD7 989 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 CMTR2Q8IYT2 770 aaKnown RBP12.12□□□□□ -0.47
USP41-202ENST00000454608 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
USP41-202ENST00000454608 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
USP41-202ENST00000454608 ZNF215Q9UL58 517 aaPredicted RBP12.12□□□□□ -0.47
USP41-202ENST00000454608 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
USP41-202ENST00000454608 H0Y858 1186 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
USP41-202ENST00000454608 DHX16O60231 1041 aaKnown RBP12.11□□□□□ -0.47
USP41-202ENST00000454608 ITGB1P05556 798 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 ADAM17P78536 824 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 SP2Q02086 613 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 SPPL3Q8TCT6 385 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 ESR2Q92731 530 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 RPGRIP1Q96KN7 1286 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
USP41-202ENST00000454608 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 SORBS3O60504 671 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 STAM2O75886 525 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 CSPG5O95196 566 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 CHRNA1P02708 482 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 GHRP10912 638 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 DNAJB1P25685 340 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 CCND2P30279 289 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 NBL1P41271 181 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 NRIP1P48552 1158 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 NEDD9Q14511 834 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 RSPH3Q86UC2 560 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 POF1BQ8WVV4 589 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 SUSD6Q92537 303 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
USP41-202ENST00000454608 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
USP41-202ENST00000454608 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
USP41-202ENST00000454608 LAMA4Q16363 1823 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 MYO10Q9HD67 2058 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 OPLAHO14841 1288 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 KDM4AO75164 1064 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 GLP2RO95838 553 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
USP41-202ENST00000454608 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
USP41-202ENST00000454608 STAG3L1P0CL83 205 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 UBE3AQ05086 875 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 MGAT3Q09327 533 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 TRAF1Q13077 416 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 LPIN1Q14693 890 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 CDCA3Q99618 268 aaPredicted RBP12.09□□□□□ -0.47
USP41-202ENST00000454608 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 TLE6Q9H808 572 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
USP41-202ENST00000454608 MX1P20591 662 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 ID4P47928 161 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 HAND2P61296 217 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 MCTP2Q6DN12 878 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 TSHZ1Q6ZSZ6 1077 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 FAM43BQ6ZT52 329 aaPredicted RBP12.08□□□□□ -0.48
USP41-202ENST00000454608 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 RBM23Q86U06 439 aaKnown RBP12.08□□□□□ -0.48
USP41-202ENST00000454608 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
USP41-202ENST00000454608 GPR20Q99678 358 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
USP41-202ENST00000454608 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
USP41-202ENST00000454608 PDE12Q6L8Q7 609 aaKnown RBP12.07□□□□□ -0.48
USP41-202ENST00000454608 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 UBALD2Q8IYN6 164 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 CRIPAKQ8N1N5 446 aa12.07□□□□□ -0.48
USP41-202ENST00000454608 IL31RAQ8NI17 732 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms