RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 MATR3P43243 847 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNHG17-207ENST00000449469 HERC4Q5GLZ8 1057 aaPredicted RBP18.55■□□□□ 0.56
SNHG17-207ENST00000449469 EMC10Q5UCC4 262 aa18.55■□□□□ 0.56
SNHG17-207ENST00000449469 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
SNHG17-207ENST00000449469 SCFD1Q8WVM8 642 aa18.55■□□□□ 0.56
SNHG17-207ENST00000449469 INPP4AQ96PE3 977 aaPredicted RBP18.55■□□□□ 0.56
SNHG17-207ENST00000449469 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
SNHG17-207ENST00000449469 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
SNHG17-207ENST00000449469 ATXN2Q99700 1313 aaKnown RBP18.54■□□□□ 0.56
SNHG17-207ENST00000449469 MYH7BA7E2Y1 1941 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 TRIM66O15016 1216 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 NCK2O43639 380 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 ZEB2O60315 1214 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 PPP1R11O60927 126 aaPredicted RBP18.54■□□□□ 0.56
SNHG17-207ENST00000449469 HLA-DOAP06340 250 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 TBC1D5Q92609 795 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 TAF4BQ92750 862 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 PBKQ96KB5 322 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 COA1Q9GZY4 146 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 EHD4Q9H223 541 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 EFCC1Q9HA90 598 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 KIAA1024Q9UPX6 916 aa18.54■□□□□ 0.56
SNHG17-207ENST00000449469 EBAG9O00559 213 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 HEXIM1O94992 359 aaKnown RBP18.53■□□□□ 0.56
SNHG17-207ENST00000449469 SLC7A5Q01650 507 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 ATP2B2Q01814 1243 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 ADAM9Q13443 819 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 KIAA0753Q2KHM9 967 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 AMIGO3Q86WK7 504 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 SPATS2Q86XZ4 545 aaKnown RBP18.53■□□□□ 0.56
SNHG17-207ENST00000449469 ANKRD13CQ8N6S4 541 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 CPP00450 1065 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNHG17-207ENST00000449469 KLRC1P26715 233 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 CFAP58Q5T655 872 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 CALR3Q96L12 384 aaKnown RBP18.53■□□□□ 0.56
SNHG17-207ENST00000449469 PSMB7Q99436 277 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 METTL14Q9HCE5 456 aaKnown RBP18.53■□□□□ 0.56
SNHG17-207ENST00000449469 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
SNHG17-207ENST00000449469 CALUO43852 315 aaPredicted RBP18.52■□□□□ 0.56
SNHG17-207ENST00000449469 KRT18P05783 430 aaKnown RBP18.52■□□□□ 0.56
SNHG17-207ENST00000449469 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 CDC37Q16543 378 aaPredicted RBP18.52■□□□□ 0.56
SNHG17-207ENST00000449469 PTF1AQ7RTS3 328 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 TEX2Q8IWB9 1127 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 IQCKQ8N0W5 287 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 DCAF4Q8WV16 495 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 TRIM34Q9BYJ4 488 aa18.52■□□□□ 0.56
SNHG17-207ENST00000449469 A0A087WUV0 522 aaPredicted RBP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 SRRM3A6NNA2 597 aaPredicted RBP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 SLC16A3O15427 465 aaKnown RBP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 SHMT1P34896 483 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 PRKCIP41743 596 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 KCNH2Q12809 1159 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 PICALMQ13492 652 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 USP38Q8NB14 1042 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 TSEN2Q8NCE0 465 aaKnown RBP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 ANO3Q9BYT9 981 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.55
SNHG17-207ENST00000449469 POLLQ9UGP5 575 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 TMEM59LQ9UK28 342 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 INTUQ9ULD6 942 aa18.52■□□□□ 0.55
SNHG17-207ENST00000449469 GRIN2DO15399 1336 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 A0A087X0T9 212 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 E9PMD0 336 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 PDXKO00764 312 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 GFPT2O94808 682 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
SNHG17-207ENST00000449469 FAM228BP0C875 321 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 NR2F2P24468 414 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 CUL1Q13616 776 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 VPS36Q86VN1 386 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 ZIM3Q96PE6 472 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
SNHG17-207ENST00000449469 HDAC9Q9UKV0 1011 aa18.51■□□□□ 0.55
SNHG17-207ENST00000449469 A0A0A6YYK5 440 aaPredicted RBP18.5■□□□□ 0.55
SNHG17-207ENST00000449469 POTEB3A0JP26 581 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 POTECB2RU33 542 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 FLOT1O75955 427 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 GLI1P08151 1106 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 MYBP10242 640 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 RPL13P26373 211 aaKnown RBP18.5■□□□□ 0.55
SNHG17-207ENST00000449469 GNGT1P63211 74 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 RPS6KA1Q15418 735 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 BMT2Q1RMZ1 405 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 POTEBQ6S5H4 581 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 KDM7AQ6ZMT4 941 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 FMNL3Q8IVF7 1028 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 NELFCDQ8IXH7 590 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 ACTRT1Q8TDG2 376 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 LMBR1Q8WVP7 490 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 LTBP4Q8N2S1 1624 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
SNHG17-207ENST00000449469 GTPBP10A4D1E9 387 aaKnown RBP18.5■□□□□ 0.55
SNHG17-207ENST00000449469 USP17L10C9JJH3 530 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms