RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 TMEM31Q5JXX7 168 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
TOP3B-209ENST00000442653 PCNX4Q63HM2 1172 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 RUFY4Q6ZNE9 571 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 CATIPQ7Z7H3 387 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 NCOA7Q8NI08 942 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 YME1L1Q96TA2 773 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 IFIH1Q9BYX4 1025 aaKnown RBP9.62□□□□□ -0.87
TOP3B-209ENST00000442653 LY9Q9HBG7 655 aa9.62□□□□□ -0.87
TOP3B-209ENST00000442653 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 H3BNC9 293 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 H3BQ06 376 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-209ENST00000442653 PIK3CDO00329 1044 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 SGSM2O43147 1006 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 ATP9AO75110 1047 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 LINC00271P0C7V0 271 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 GNAT1P11488 350 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 ITGB5P18084 799 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 TCF7P36402 384 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-209ENST00000442653 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 TCEAL5Q5H9L2 206 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 FAM26DQ5JW98 314 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-209ENST00000442653 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 GJD3Q8N144 294 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
TOP3B-209ENST00000442653 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 SMARCC2Q8TAQ2 1214 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 NEK9Q8TD19 979 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 RUFY2Q8WXA3 655 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 MAP4K1Q92918 833 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 SPZ1Q9BXG8 430 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
TOP3B-209ENST00000442653 NLRC5Q86WI3 1866 aa9.61□□□□□ -0.87
TOP3B-209ENST00000442653 ATG2AQ2TAZ0 1938 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 NRCAMQ92823 1304 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 GPR37L1O60883 481 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 DDAH1O94760 285 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 GHRP10912 638 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 KCNA2P16389 499 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 RXRAP19793 462 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 GPM6BQ13491 265 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 LPIN1Q14693 890 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 PTPROQ16827 1216 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 TIGD5Q53EQ6 642 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 XRRA1Q6P2D8 792 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 SRBD1Q8N5C6 995 aaKnown RBP9.6□□□□□ -0.87
TOP3B-209ENST00000442653 CTCFLQ8NI51 663 aaPredicted RBP9.6□□□□□ -0.87
TOP3B-209ENST00000442653 APBB2Q92870 758 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 ZBTB10Q96DT7 871 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 RRP36Q96EU6 259 aaKnown RBP9.6□□□□□ -0.87
TOP3B-209ENST00000442653 SAMD11Q96NU1 681 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 MAP3K14Q99558 947 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 EHMT1Q9H9B1 1298 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 RC3H2Q9HBD1 1191 aaKnown RBP9.6□□□□□ -0.87
TOP3B-209ENST00000442653 PKD2L1Q9P0L9 805 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 HCN4Q9Y3Q4 1203 aa9.6□□□□□ -0.87
TOP3B-209ENST00000442653 RBM8AQ9Y5S9 174 aaKnown RBP9.6□□□□□ -0.87
TOP3B-209ENST00000442653 GSTTP1A0A1W2PQM5 241 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 hCG_1642624A0A1W2PR95 340 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 PRC1O43663 620 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 MARK3P27448 753 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
TOP3B-209ENST00000442653 KIF5BP33176 963 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 MGAT3Q09327 533 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 GRIK4Q16099 956 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 UBE2SQ16763 222 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 MARCH8Q5T0T0 291 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 TAF2Q6P1X5 1199 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 NLRX1Q86UT6 975 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 CUL5Q93034 780 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 PABPC5Q96DU9 382 aaKnown RBP9.59□□□□□ -0.87
TOP3B-209ENST00000442653 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 NSUN3Q9H649 340 aaKnown RBP9.59□□□□□ -0.87
TOP3B-209ENST00000442653 PSTPIP2Q9H939 334 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 SEC63Q9UGP8 760 aaKnown RBP9.59□□□□□ -0.87
TOP3B-209ENST00000442653 TUBE1Q9UJT0 475 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 RALGAPA2Q2PPJ7 1873 aa9.59□□□□□ -0.87
TOP3B-209ENST00000442653 TTC3P53804 2025 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 KAT6AQ92794 2004 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 MBLAC1A4D2B0 266 aaPredicted RBP9.58□□□□□ -0.88
TOP3B-209ENST00000442653 C5orf67F2Z3F1 127 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 SH2B2O14492 632 aaPredicted RBP9.58□□□□□ -0.88
TOP3B-209ENST00000442653 GRM6O15303 877 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 CTNNB1P35222 781 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 LTBRP36941 435 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 ZP2Q05996 745 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 FBXO47Q5MNV8 452 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
TOP3B-209ENST00000442653 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms