RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 DGKIO75912 1065 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 CHRNA1P02708 482 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 IQCA1Q86XH1 822 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 TBC1D10CQ8IV04 446 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
SYN3-204ENST00000441821 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 KAT14Q9H8E8 782 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 VAT1LQ9HCJ6 419 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 MYO7AQ13402 2215 aa11.62□□□□□ -0.55
SYN3-204ENST00000441821 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 NOP56O00567 594 aaKnown RBP11.61□□□□□ -0.55
SYN3-204ENST00000441821 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
SYN3-204ENST00000441821 DNAJB1P25685 340 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 CCND2P30279 289 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 AVPR2P30518 371 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 NUBP1P53384 320 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
SYN3-204ENST00000441821 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 SPPL3Q8TCT6 385 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 ATOH1Q92858 354 aaPredicted RBP11.61□□□□□ -0.55
SYN3-204ENST00000441821 ASIC4Q96FT7 647 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 PHF7Q9BWX1 381 aaPredicted RBP11.61□□□□□ -0.55
SYN3-204ENST00000441821 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 FAM86C1Q9NVL1 165 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 RCAN3Q9UKA8 241 aa11.61□□□□□ -0.55
SYN3-204ENST00000441821 NEDD4P46934 1319 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 PROB1E7EW31 1015 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 CSPG5O95196 566 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 GHRP10912 638 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 HOXA13P31271 388 aaPredicted RBP11.6□□□□□ -0.55
SYN3-204ENST00000441821 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 NEDD9Q14511 834 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 LPIN1Q14693 890 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 TAF2Q6P1X5 1199 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 METTL7BQ6UX53 244 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 ADGRD2Q7Z7M1 963 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
SYN3-204ENST00000441821 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 MTMR8Q96EF0 704 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 GPR20Q99678 358 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
SYN3-204ENST00000441821 USP15Q9Y4E8 981 aaPredicted RBP11.6□□□□□ -0.55
SYN3-204ENST00000441821 PCDHA1Q9Y5I3 950 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 MRPL42Q9Y6G3 142 aaKnown RBP11.6□□□□□ -0.55
SYN3-204ENST00000441821 MYH6P13533 1939 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
SYN3-204ENST00000441821 ZNF213O14771 459 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 ZBTB5O15062 677 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 KDM4AO75164 1064 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 STAM2O75886 525 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 GLP2RO95838 553 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 ITGB1P05556 798 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 ATF7P17544 494 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 ICAM3P32942 547 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 NRIP1P48552 1158 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 MGAT3Q09327 533 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 GNPTABQ3T906 1256 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 CYFIP1Q7L576 1253 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 CMTR2Q8IYT2 770 aaKnown RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 ENAHQ8N8S7 591 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 POF1BQ8WVV4 589 aa11.59□□□□□ -0.55
SYN3-204ENST00000441821 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 BARX2Q9UMQ3 279 aaPredicted RBP11.59□□□□□ -0.55
SYN3-204ENST00000441821 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 SPATA31C2B4DYI2 1134 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 GCOM1H8Y6P7 765 aaPredicted RBP11.58□□□□□ -0.56
SYN3-204ENST00000441821 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 MRPS9P82933 396 aaKnown RBP11.58□□□□□ -0.56
SYN3-204ENST00000441821 TRAF1Q13077 416 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 PTPN21Q16825 1174 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 FBXO47Q5MNV8 452 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 RSPH3Q86UC2 560 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 SUSD6Q92537 303 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 INPP4AQ96PE3 977 aaPredicted RBP11.58□□□□□ -0.56
SYN3-204ENST00000441821 ZSWIM5Q9P217 1185 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 SUPT16HQ9Y5B9 1047 aaKnown RBP11.58□□□□□ -0.56
SYN3-204ENST00000441821 TTC3P53804 2025 aa11.58□□□□□ -0.56
SYN3-204ENST00000441821 FRYLO94915 3013 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 FSD2A1L4K1 749 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 H0Y858 1186 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
SYN3-204ENST00000441821 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
SYN3-204ENST00000441821 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
SYN3-204ENST00000441821 RBM23Q86U06 439 aaKnown RBP11.57□□□□□ -0.56
SYN3-204ENST00000441821 FCHSD1Q86WN1 690 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 NPAS4Q8IUM7 802 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 STAG2Q8N3U4 1231 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms