RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 EHMT1Q9H9B1 1298 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 TLR9Q9NR96 1032 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 BARX2Q9UMQ3 279 aaPredicted RBP9.51□□□□□ -0.89
ITSN1-216ENST00000428240 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
ITSN1-216ENST00000428240 PCDHGC5Q9Y5F6 944 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 ZMYM6O95789 1325 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 CCDC171Q6TFL3 1326 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 SALL3Q9BXA9 1300 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 DCHS1Q96JQ0 3298 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
ITSN1-216ENST00000428240 DGKIO75912 1065 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 GNAT1P11488 350 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 NRIP1P48552 1158 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
ITSN1-216ENST00000428240 MGAT3Q09327 533 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 LPIN1Q14693 890 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 MCMDC2Q4G0Z9 681 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 ASPRV1Q53RT3 343 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 CYFIP1Q7L576 1253 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 ASCL5Q7RTU5 278 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 STAG2Q8N3U4 1231 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 SPPL3Q8TCT6 385 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 ESR2Q92731 530 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 P2RX5Q93086 422 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 EVI5LQ96CN4 794 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 PHF7Q9BWX1 381 aaPredicted RBP9.5□□□□□ -0.89
ITSN1-216ENST00000428240 PLVAPQ9BX97 442 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 AMNQ9BXJ7 453 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 USP26Q9BXU7 913 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 KAT14Q9H8E8 782 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
ITSN1-216ENST00000428240 MYO7AQ13402 2215 aa9.5□□□□□ -0.89
ITSN1-216ENST00000428240 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 KDM4AO75164 1064 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 PDGFBP01127 241 aaPredicted RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 PARP1P09874 1014 aaKnown RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 PCP11498 1178 aaKnown RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 CCND2P30279 289 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 FOXK2Q01167 660 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 NMIQ13287 307 aaPredicted RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 UTP14CQ5TAP6 766 aaKnown RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 CRIPAKQ8N1N5 446 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 POF1BQ8WVV4 589 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 LINC01599Q8WXQ3 324 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
ITSN1-216ENST00000428240 GPR20Q99678 358 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 RCAN3Q9UKA8 241 aa9.49□□□□□ -0.89
ITSN1-216ENST00000428240 MYH7BA7E2Y1 1941 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 ZFHX2Q9C0A1 2572 aaPredicted RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PER2O15055 1255 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PPFIA3O75145 1194 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 ICAM3P32942 547 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 MRPS9P82933 396 aaKnown RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 SP4Q02446 784 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PAN2Q504Q3 1202 aaKnown RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 FBXO47Q5MNV8 452 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 METTL7BQ6UX53 244 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 RTN4RL1Q86UN2 441 aaPredicted RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 IQCA1Q86XH1 822 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 ENAHQ8N8S7 591 aaPredicted RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 VN1R2Q8NFZ6 395 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 MTMR8Q96EF0 704 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 RNF41Q9H4P4 317 aaPredicted RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 AGO3Q9H9G7 860 aaKnown RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 MAP3K20Q9NYL2 800 aaKnown RBP9.48□□□□□ -0.89
ITSN1-216ENST00000428240 RTEL1Q9NZ71 1219 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 PCDHA1Q9Y5I3 950 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 NRCAMQ92823 1304 aa9.48□□□□□ -0.89
ITSN1-216ENST00000428240 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 B4E1Z4 1266 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 PROB1E7EW31 1015 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 GCOM1H8Y6P7 765 aaPredicted RBP9.47□□□□□ -0.89
ITSN1-216ENST00000428240 ZNF213O14771 459 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 ZBTB5O15062 677 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 POLR2MP0CAP2 368 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 CD52P31358 61 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 GATMP50440 423 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 NEDD9Q14511 834 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 PTPN21Q16825 1174 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 SLC35G1Q2M3R5 365 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 CMTR2Q8IYT2 770 aaKnown RBP9.47□□□□□ -0.89
ITSN1-216ENST00000428240 DNAJB3Q8WWF6 145 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 SUSD6Q92537 303 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 ZBTB10Q96DT7 871 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 INPP4AQ96PE3 977 aaPredicted RBP9.47□□□□□ -0.89
ITSN1-216ENST00000428240 IRF2BPLQ9H1B7 796 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 ZSWIM5Q9P217 1185 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 ZNF215Q9UL58 517 aaPredicted RBP9.47□□□□□ -0.89
ITSN1-216ENST00000428240 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
ITSN1-216ENST00000428240 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms