RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 TMEM260Q9NX78 707 aa21.4■■□□□ 1.02
HCG18-235ENST00000426882 HESX1Q9UBX0 185 aa21.4■■□□□ 1.02
HCG18-235ENST00000426882 MROH7-TTC4A0A0A0MT08 1334 aa21.39■■□□□ 1.02
HCG18-235ENST00000426882 SRGAP2O75044 1071 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 MRPS25P82663 173 aaKnown RBP21.39■■□□□ 1.01
HCG18-235ENST00000426882 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 DPF2Q92785 391 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 FAM160B1Q5W0V3 765 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 CCDC125Q86Z20 511 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 LMNTD2Q8IXW0 634 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 ATP2A3Q93084 1043 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 TRIM11Q96F44 468 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 KCNF1Q9H3M0 494 aa21.39■■□□□ 1.01
HCG18-235ENST00000426882 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.39■■□□□ 1.01
HCG18-235ENST00000426882 INO80Q9ULG1 1556 aaPredicted RBP21.39■■□□□ 1.01
HCG18-235ENST00000426882 E9PMD0 336 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 RFX5P48382 616 aaPredicted RBP21.38■■□□□ 1.01
HCG18-235ENST00000426882 RASSF2P50749 326 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 PIGOQ8TEQ8 1089 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 RILPQ96NA2 401 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 TTC26A0AVF1 554 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 MAN1A1P33908 653 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 CLNS1AP54105 237 aaKnown RBP21.38■■□□□ 1.01
HCG18-235ENST00000426882 SGO2Q562F6 1265 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 KRT27Q7Z3Y8 459 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 FAM160B2Q86V87 743 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 KSR1Q8IVT5 923 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 GABPB2Q8TAK5 448 aaPredicted RBP21.38■■□□□ 1.01
HCG18-235ENST00000426882 RAD54LQ92698 747 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 AP1M1Q9BXS5 423 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 PCDHA6Q9UN73 950 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 PCDHA8Q9Y5H6 950 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 LRRC53A6NM62 1247 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 MMP10P09238 476 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 NNTQ13423 1086 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 SNX1Q13596 522 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 PROM2Q8N271 834 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 SRBD1Q8N5C6 995 aaKnown RBP21.38■■□□□ 1.01
HCG18-235ENST00000426882 PPP1R12CQ9BZL4 782 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 MIS12Q9H081 205 aa21.38■■□□□ 1.01
HCG18-235ENST00000426882 USP17L10C9JJH3 530 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 TSNAXIP1Q2TAA8 658 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 DCAF4Q8WV16 495 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 HSPA6P17066 643 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 EIF2AK2P19525 551 aaKnown RBP21.37■■□□□ 1.01
HCG18-235ENST00000426882 USP14P54578 494 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 IGBP1P78318 339 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 CC2D1AQ6P1N0 951 aaPredicted RBP21.37■■□□□ 1.01
HCG18-235ENST00000426882 SEPT12Q8IYM1 358 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 ODF2LQ9ULJ1 636 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 CSF1RP07333 972 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 ANTXR2P58335 489 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 PDIA6Q15084 440 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 SFR1Q86XK3 245 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 STAG2Q8N3U4 1231 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 TBC1D31Q96DN5 1066 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 FAM196BA6NMK8 535 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 ECEL1O95672 775 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 SARNPP82979 210 aaKnown RBP21.37■■□□□ 1.01
HCG18-235ENST00000426882 WHAMMQ8TF30 809 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 CEP72Q9P209 647 aa21.37■■□□□ 1.01
HCG18-235ENST00000426882 RRP15Q9Y3B9 282 aaKnown RBP21.37■■□□□ 1.01
HCG18-235ENST00000426882 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 CRKP46108 304 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 LMNB2Q03252 620 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 IFT88Q13099 833 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 DIP2CQ9Y2E4 1556 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 FAM205CA6NFA0 338 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 POC1B-GALNT4F8VUJ3 575 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 M0QZ92 97 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 ARHGEF1Q92888 912 aaKnown RBP21.36■■□□□ 1.01
HCG18-235ENST00000426882 KCNQ2O43526 872 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 EMBQ6PCB8 327 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 NFU1Q9UMS0 254 aa21.36■■□□□ 1.01
HCG18-235ENST00000426882 ALS2CLQ60I27 953 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 HAUS1Q96CS2 278 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 ANO9A1A5B4 782 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 PPM1FP49593 454 aaPredicted RBP21.35■■□□□ 1.01
HCG18-235ENST00000426882 COASYQ13057 564 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 TRIM50Q86XT4 487 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 CDHR1Q96JP9 859 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 C1orf167Q5SNV9 1468 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 POTEB3A0JP26 581 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 POTECB2RU33 542 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 POTEBQ6S5H4 581 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 NSUN4Q96CB9 384 aaKnown RBP21.35■■□□□ 1.01
HCG18-235ENST00000426882 GOLGA8IPA6NC78 632 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 GOLGA8JA6NMD2 632 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 INO80B-WBP1J3KQ70 363 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 CRCPO75575 148 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 PALMO75781 387 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 FDPSP14324 419 aaKnown RBP21.35■■□□□ 1.01
HCG18-235ENST00000426882 TERF2Q15554 542 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 NEDD1Q8NHV4 660 aa21.35■■□□□ 1.01
HCG18-235ENST00000426882 INO80BQ9C086 356 aaPredicted RBP21.35■■□□□ 1.01
HCG18-235ENST00000426882 SEPT14Q6ZU15 432 aa21.34■■□□□ 1.01
HCG18-235ENST00000426882 MASTLQ96GX5 879 aa21.34■■□□□ 1.01
HCG18-235ENST00000426882 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
HCG18-235ENST00000426882 GYS2P54840 703 aa21.34■■□□□ 1.01
HCG18-235ENST00000426882 ARHGAP4P98171 946 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms