RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 MSCO60682 206 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 ATP9AO75110 1047 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 DUSP11O75319 330 aaKnown RBP17.6■□□□□ 0.41
SHOX2-202ENST00000425436 TDP2O95551 362 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 PFKFB1P16118 471 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 PRR16Q569H4 304 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 NEK8Q86SG6 692 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 XPNPEP3Q9NQH7 507 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 KCNH7Q9NS40 1196 aa17.6■□□□□ 0.41
SHOX2-202ENST00000425436 FRMPD3Q5JV73 1810 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 IGLV3-22A0A075B6J6 115 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 WNT7AO00755 349 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
SHOX2-202ENST00000425436 ICAM3P32942 547 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 CIITAP33076 1130 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 GJA8P48165 433 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 SOX10P56693 466 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 GPRASP2Q96D09 838 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
SHOX2-202ENST00000425436 DNAH12Q6ZR08 3092 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 MYADML2A6NDP7 307 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.41
SHOX2-202ENST00000425436 TGFB3P10600 412 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 UBA1P22314 1058 aaKnown RBP17.58■□□□□ 0.41
SHOX2-202ENST00000425436 BEX3Q00994 111 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 ANO6Q4KMQ2 910 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 KANK3Q6NY19 840 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 KCNV1Q6PIU1 500 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 SHC4Q6S5L8 630 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 TLK2Q86UE8 772 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 CRISPLD2Q9H0B8 497 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.41
SHOX2-202ENST00000425436 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
SHOX2-202ENST00000425436 GGPS1O95749 300 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 C6orf222P0C671 652 aaPredicted RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 ZNF165P49910 485 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 CYFIP1Q7L576 1253 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 DHX37Q8IY37 1157 aaKnown RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 OR6J1Q8NGC5 347 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 GJA10Q969M2 543 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 LENG9Q96B70 501 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 PYM1Q9BRP8 204 aaKnown RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 AP5M1Q9H0R1 490 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 AGO4Q9HCK5 861 aaKnown RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 CCDC39Q9UFE4 941 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 FBXO2Q9UK22 296 aaPredicted RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 OGDHLQ9ULD0 1010 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 CYP3A7-CYP3A51PA0A087WV96 503 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 SLC37A4O43826 429 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 GH1P01241 217 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 CYP3A7P24462 503 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 GJA9P57773 515 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 ARHGAP1Q07960 439 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 TTC38Q5R3I4 469 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 NIPA1Q7RTP0 329 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 DDX25Q9UHL0 483 aaKnown RBP17.57■□□□□ 0.4
SHOX2-202ENST00000425436 TELO2Q9Y4R8 837 aa17.57■□□□□ 0.4
SHOX2-202ENST00000425436 NKRFO15226 690 aaKnown RBP eCLIP17.56■□□□□ 0.4
SHOX2-202ENST00000425436 MSH4O15457 936 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 MAFGO15525 162 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 KCNA2P16389 499 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 SP4Q02446 784 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 LRRC41Q15345 812 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 GNASQ5JWF2 1037 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 CELF3Q5SZQ8 465 aaKnown RBP17.56■□□□□ 0.4
SHOX2-202ENST00000425436 CEP57L1Q8IYX8 460 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 ZNF577Q9BSK1 485 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 CBX8Q9HC52 389 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 USP25Q9UHP3 1055 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 Q9Y3F1 56 aa17.56■□□□□ 0.4
SHOX2-202ENST00000425436 MKI67P46013 3256 aaKnown RBP17.56■□□□□ 0.4
SHOX2-202ENST00000425436 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
SHOX2-202ENST00000425436 ITGB3BPQ13352 177 aaPredicted RBP17.55■□□□□ 0.4
SHOX2-202ENST00000425436 NEDD9Q14511 834 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 ZNF174Q15697 407 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 Q4G0T1 1027 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 ARL6IP4Q66PJ3 421 aaKnown RBP17.55■□□□□ 0.4
SHOX2-202ENST00000425436 PPP4R3AQ6IN85 833 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 ARRDC4Q8NCT1 418 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 AFG1LQ8WV93 481 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 MBOAT7Q96N66 472 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 UPF3AQ9H1J1 476 aaKnown RBP17.55■□□□□ 0.4
SHOX2-202ENST00000425436 SPC25Q9HBM1 224 aa17.55■□□□□ 0.4
SHOX2-202ENST00000425436 GOLGA6L19H0YKK7 550 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 IPO5O00410 1097 aaKnown RBP17.54■□□□□ 0.4
SHOX2-202ENST00000425436 MCM7P33993 719 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 SETQ01105 290 aaPredicted RBP17.54■□□□□ 0.4
SHOX2-202ENST00000425436 LAMC2Q13753 1193 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 KCNA10Q16322 511 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 FSCN1Q16658 493 aaKnown RBP17.54■□□□□ 0.4
SHOX2-202ENST00000425436 HSDL1Q3SXM5 330 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 MOXD1Q6UVY6 613 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 RNF180Q86T96 592 aa17.54■□□□□ 0.4
SHOX2-202ENST00000425436 CNNM3Q8NE01 707 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms