RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CYP11B2P19099 503 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 CARSP49589 748 aaKnown RBP17.4■□□□□ 0.38
CDH1-202ENST00000422392 EPHB4P54760 987 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 ADAM9Q13443 819 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 KCTD10Q9H3F6 313 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 BCAS3Q9H6U6 928 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
CDH1-202ENST00000422392 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.38
CDH1-202ENST00000422392 PSMC6P62333 389 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 NFIAQ12857 509 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 TRADDQ15628 312 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 KIAA0753Q2KHM9 967 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 ARSHQ5FYA8 562 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 IFT81Q8WYA0 676 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 NFU1Q9UMS0 254 aa17.39■□□□□ 0.38
CDH1-202ENST00000422392 FAM153BP0C7A2 387 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 CACNB3P54284 484 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 FAM153CQ494X1 144 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 CFAP221Q4G0U5 840 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 CCDC65Q8IXS2 484 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 NT5C3AQ9H0P0 336 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 FAM153AQ9UHL3 310 aa17.39■□□□□ 0.37
CDH1-202ENST00000422392 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 EPS15P42566 896 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 KLHL30Q0D2K2 578 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 RNF10Q8N5U6 811 aaKnown RBP17.38■□□□□ 0.37
CDH1-202ENST00000422392 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
CDH1-202ENST00000422392 EDEM3Q9BZQ6 932 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
CDH1-202ENST00000422392 KRT14P02533 472 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 GUCY2DQ02846 1103 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 NAB2Q15742 525 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 SLC18A3Q16572 532 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 TTMPQ5BVD1 217 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 KCTD16Q68DU8 428 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
CDH1-202ENST00000422392 KRT12Q99456 494 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 EPB41L5Q9HCM4 733 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 PCDHAC2Q9Y5I4 1007 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 KDM3AQ9Y4C1 1321 aa17.38■□□□□ 0.37
CDH1-202ENST00000422392 HEXIM1O94992 359 aaKnown RBP17.37■□□□□ 0.37
CDH1-202ENST00000422392 SLC9A1P19634 815 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 NR2F2P24468 414 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 ZIM3Q96PE6 472 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 FAM170AA1A519 330 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 IRAK1P51617 712 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 GUCY2FP51841 1108 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 TCP10Q12799 353 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDH1-202ENST00000422392 HYIQ5T013 277 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 SH2D3CQ8N5H7 860 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 SH3GL2Q99962 352 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 ANO3Q9BYT9 981 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 TSPYL1Q9H0U9 437 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 GANQ9H2C0 597 aa17.37■□□□□ 0.37
CDH1-202ENST00000422392 SHOX2O60902 331 aaPredicted RBP17.36■□□□□ 0.37
CDH1-202ENST00000422392 BBOX1O75936 387 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 SEPT2Q15019 361 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 PRR16Q569H4 304 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
CDH1-202ENST00000422392 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 PROCA1Q8NCQ7 364 aaPredicted RBP17.36■□□□□ 0.37
CDH1-202ENST00000422392 DNAJC18Q9H819 358 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 GRID2IPA4D2P6 1211 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
CDH1-202ENST00000422392 SLC12A3P55017 1021 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 PTK2Q05397 1052 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 DDR1Q08345 913 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 ASIC2Q16515 512 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 EMBQ6PCB8 327 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 CATSPER3Q86XQ3 398 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 RUFY1Q96T51 708 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 KCNMB3Q9NPA1 279 aa17.36■□□□□ 0.37
CDH1-202ENST00000422392 CCT5P48643 541 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 MEI1Q5TIA1 1274 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 CCDC43Q96MW1 224 aaKnown RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 CAPS2Q9BXY5 557 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 HDAC9Q9UKV0 1011 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 RSPH10B2B2RC85 870 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 HSF2BPO75031 334 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 RSPH10BP0C881 870 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 MARSP56192 900 aaKnown RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 GNGT1P63211 74 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 USH1GQ495M9 461 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 SFR1Q86XK3 245 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms