RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 GGPS1O95749 300 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 KRT85P78386 507 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 SP2Q02086 613 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 ITGB3BPQ13352 177 aaPredicted RBP16.32■□□□□ 0.2
SGCE-202ENST00000415788 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
SGCE-202ENST00000415788 HAS1Q92839 578 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 TEKT3Q9BXF9 490 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 TTC12Q9H892 705 aaPredicted RBP16.32■□□□□ 0.2
SGCE-202ENST00000415788 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 SPC25Q9HBM1 224 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 JPH1Q9HDC5 661 aaPredicted RBP16.32■□□□□ 0.2
SGCE-202ENST00000415788 PKD2L1Q9P0L9 805 aa16.32■□□□□ 0.2
SGCE-202ENST00000415788 PSMD10O75832 226 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 FARP2O94887 1054 aaPredicted RBP16.31■□□□□ 0.2
SGCE-202ENST00000415788 YEATS4O95619 227 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 CCL5P13501 91 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 KRT76Q01546 638 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 DNM1Q05193 864 aaKnown RBP16.31■□□□□ 0.2
SGCE-202ENST00000415788 TLK2Q86UE8 772 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 C4orf32Q8N8J7 132 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
SGCE-202ENST00000415788 ADCY6O43306 1168 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 ZSCAN20P17040 1043 aaPredicted RBP16.31■□□□□ 0.2
SGCE-202ENST00000415788 SLC39A14Q15043 492 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 CYFIP1Q7L576 1253 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 ZNF830Q96NB3 372 aaPredicted RBP16.31■□□□□ 0.2
SGCE-202ENST00000415788 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
SGCE-202ENST00000415788 KIAA1217Q5T5P2 1943 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 CAPN2P17655 700 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 NKX3-2P78367 333 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 ARHGAP1Q07960 439 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 STK38Q15208 465 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 PTPAQ15257 358 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 MTFR1Q15390 333 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 TMEM266Q2M3C6 531 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 BRDTQ58F21 947 aaPredicted RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 ZNF746Q6NUN9 644 aaPredicted RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 FTOQ9C0B1 505 aaKnown RBP eCLIP16.3■□□□□ 0.2
SGCE-202ENST00000415788 UPF3AQ9H1J1 476 aaKnown RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
SGCE-202ENST00000415788 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
SGCE-202ENST00000415788 DYNC1LI2O43237 492 aaPredicted RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 TXKP42681 527 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
SGCE-202ENST00000415788 GJA9P57773 515 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 PPP2R5CQ13362 524 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 TMEM63BQ5T3F8 832 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 COPS5Q92905 334 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 SCAND2PQ9GZW5 306 aaPredicted RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 NOP56O00567 594 aaKnown RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 SFNP31947 248 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 CPT1AP50416 773 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 JAK3P52333 1124 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 GJC2Q5T442 439 aaPredicted RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 LHX8Q68G74 356 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
SGCE-202ENST00000415788 LENG1Q96BZ8 264 aaPredicted RBP16.29■□□□□ 0.2
SGCE-202ENST00000415788 ELP1O95163 1332 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 SYNRGQ9UMZ2 1314 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 WDR64B1ANS9 1081 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 PPP6R2O75170 966 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 KIF20AO95235 890 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 GJB1P08034 283 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
SGCE-202ENST00000415788 SYCP1Q15431 976 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 GJA10Q969M2 543 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 VAV3Q9UKW4 847 aa16.28■□□□□ 0.2
SGCE-202ENST00000415788 A6NJR5 290 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 DDX39AO00148 427 aaKnown RBP16.27■□□□□ 0.2
SGCE-202ENST00000415788 SPTLC2O15270 562 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 ZEB2O60315 1214 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 ADAMTS4O75173 837 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 PDIA5Q14554 519 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 RNF180Q86T96 592 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 AFG1LQ8WV93 481 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms