RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SLC26A2P50443 739 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 JAK3P52333 1124 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 SOX10P56693 466 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 ACTR2P61160 394 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 BEX3Q00994 111 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 PTPN11Q06124 597 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-207ENST00000415107 CALCRLQ16602 461 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
ATG4B-207ENST00000415107 ATL3Q6DD88 541 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 KAT2BQ92831 832 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 PAWRQ96IZ0 340 aaKnown RBP13.46□□□□□ -0.25
ATG4B-207ENST00000415107 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.25
ATG4B-207ENST00000415107 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 A0A0U1RQG5 324 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 F13A1P00488 732 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 HOXC8P31273 242 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 MCM7P33993 719 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 TCF7P36402 384 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 ATP2C1P98194 919 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 NFRKBQ6P4R8 1299 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 PLPPR4Q7Z2D5 763 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 DIS3LQ8TF46 1054 aaKnown RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 TMEM60Q9H2L4 133 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 ZNF215Q9UL58 517 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 CIZ1Q9ULV3 898 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-207ENST00000415107 PCDHB6Q9Y5E3 794 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
ATG4B-207ENST00000415107 SUPT20HL2P0C7V6 817 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 CDK7P50613 346 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATG4B-207ENST00000415107 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 ANKRD33Q7Z3H0 272 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 NEK9Q8TD19 979 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 TOX2Q96NM4 488 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 PCYT2Q99447 389 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 PKD2L1Q9P0L9 805 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 CEP131Q9UPN4 1083 aa13.44□□□□□ -0.26
ATG4B-207ENST00000415107 MAFBQ9Y5Q3 323 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-207ENST00000415107 GRIN2DO15399 1336 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 MKI67P46013 3256 aaKnown RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 H3BRB1 525 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 PSAPP07602 524 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 NASPP49321 788 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 NUCB2P80303 420 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 PTGDRQ13258 359 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 PKP1Q13835 747 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 PDIA5Q14554 519 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 ZNF174Q15697 407 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 IGSF22Q8N9C0 903 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 TUT1Q9H6E5 874 aaKnown RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 DISC1Q9NRI5 854 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 ZDHHC9Q9Y397 364 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
ATG4B-207ENST00000415107 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 WDR81Q562E7 1941 aa13.43□□□□□ -0.26
ATG4B-207ENST00000415107 ARVCFO00192 962 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 MYL3P08590 195 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 MUTP22033 750 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 PSEN2P49810 448 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 NBR1Q14596 966 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 PTPAQ15257 358 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 EPHA7Q15375 998 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 FAM160B1Q5W0V3 765 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 MIER3Q7Z3K6 550 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 TNPO1Q92973 898 aaKnown RBP13.42□□□□□ -0.26
ATG4B-207ENST00000415107 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-207ENST00000415107 AZI2Q9H6S1 392 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 ATP6V1DQ9Y5K8 247 aa13.42□□□□□ -0.26
ATG4B-207ENST00000415107 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
ATG4B-207ENST00000415107 SLC26A4O43511 780 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
ATG4B-207ENST00000415107 LYPLA2O95372 231 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 YEATS4O95619 227 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 STAT5BP51692 787 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 MFSD10Q14728 455 aa13.41□□□□□ -0.26
ATG4B-207ENST00000415107 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms