RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PDE1AP54750 535 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 PTPN5P54829 565 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 ADAM17P78536 824 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 CAMK1Q14012 370 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 CCDC178Q5BJE1 867 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 LMBR1Q8WVP7 490 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 MTMR8Q96EF0 704 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
RFFL-203ENST00000413582 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
RFFL-203ENST00000413582 MLXIPQ9HAP2 919 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 VAT1LQ9HCJ6 419 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 SETD4Q9NVD3 440 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 MAP3K20Q9NYL2 800 aaKnown RBP11.1□□□□□ -0.63
RFFL-203ENST00000413582 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
RFFL-203ENST00000413582 TMEM221A6NGB7 291 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 B4E1Z4 1266 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 M0R296 226 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 NOP56O00567 594 aaKnown RBP11.09□□□□□ -0.63
RFFL-203ENST00000413582 EYA4O95677 639 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 GHRP10912 638 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 TCF15Q12870 199 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 METTL7BQ6UX53 244 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 SAMD3Q8N6K7 520 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 SMRP1Q8NCR6 262 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 ZNF689Q96CS4 500 aaPredicted RBP11.09□□□□□ -0.63
RFFL-203ENST00000413582 GPR20Q99678 358 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 USP26Q9BXU7 913 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 IGFLR1Q9H665 355 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 ALG13Q9NP73 1137 aaKnown RBP11.09□□□□□ -0.63
RFFL-203ENST00000413582 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
RFFL-203ENST00000413582 LOC730098B7Z3J9 87 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ZNF213O14771 459 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ZBTB5O15062 677 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ST18O60284 1047 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 CHRNA1P02708 482 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 GNAT1P11488 350 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ICAM3P32942 547 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 NDUFV1P49821 464 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ARHGAP4P98171 946 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 MGAT3Q09327 533 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ADAM15Q13444 863 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 PKN1Q16512 942 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 SLC35G1Q2M3R5 365 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 ADGRD2Q7Z7M1 963 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
RFFL-203ENST00000413582 PRRX2Q99811 253 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 PCDHA1Q9Y5I3 950 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 PLXNA4Q9HCM2 1894 aa11.08□□□□□ -0.64
RFFL-203ENST00000413582 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 KLRF2D3W0D1 207 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 DNAJB1P25685 340 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 ZXDAP98168 799 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 COASYQ13057 564 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 BTG3Q14201 252 aaPredicted RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 NEDD9Q14511 834 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 LPIN1Q14693 890 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 CBX2Q14781 532 aaPredicted RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 GNPTABQ3T906 1256 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 ANKRD45Q5TZF3 282 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 CYFIP1Q7L576 1253 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 FCHSD1Q86WN1 690 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 SUGP1Q8IWZ8 645 aaKnown RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 EFHBQ8N7U6 833 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 LINC01599Q8WXQ3 324 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 P2RX5Q93086 422 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 PBXIP1Q96AQ6 731 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 ZSWIM5Q9P217 1185 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 ZNF215Q9UL58 517 aaPredicted RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 PLAGL2Q9UPG8 496 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
RFFL-203ENST00000413582 NRCAMQ92823 1304 aa11.07□□□□□ -0.64
RFFL-203ENST00000413582 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 ENPP3O14638 875 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 FIBPO43427 364 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 DGKIO75912 1065 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 GLP2RO95838 553 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 ITGB1P05556 798 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 TAF2Q6P1X5 1199 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 CMTR2Q8IYT2 770 aaKnown RBP11.06□□□□□ -0.64
RFFL-203ENST00000413582 FBXL6Q8N531 539 aa11.06□□□□□ -0.64
RFFL-203ENST00000413582 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms