RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 REV3LO60673 3130 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.44■■□□□ 1.02
ITGA6-204ENST00000412899 CCDC69A6NI79 296 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 PRC1O43663 620 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 TMTC2Q8N394 836 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 MRPL38Q96DV4 380 aaKnown RBP21.44■■□□□ 1.02
ITGA6-204ENST00000412899 MTA3Q9BTC8 594 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 IFIH1Q9BYX4 1025 aaKnown RBP21.44■■□□□ 1.02
ITGA6-204ENST00000412899 NRCAMQ92823 1304 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 TRANK1O15050 2925 aa21.44■■□□□ 1.02
ITGA6-204ENST00000412899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.43■■□□□ 1.02
ITGA6-204ENST00000412899 PLEKHA8P1O95397 391 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 KCNA5P22460 613 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 TCF7P36402 384 aaPredicted RBP21.43■■□□□ 1.02
ITGA6-204ENST00000412899 ADAM17P78536 824 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 FAM26DQ5JW98 314 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 PSTPIP2Q9H939 334 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 DOCK5Q9H7D0 1870 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 NCOR1O75376 2440 aa21.43■■□□□ 1.02
ITGA6-204ENST00000412899 MCM5P33992 734 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 GPM6BQ13491 265 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 LEXMQ3ZCV2 418 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 TMEM192Q8IY95 271 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
ITGA6-204ENST00000412899 SRBD1Q8N5C6 995 aaKnown RBP21.42■■□□□ 1.02
ITGA6-204ENST00000412899 GPRASP2Q96D09 838 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 CDHR1Q96JP9 859 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 LRFN3Q9BTN0 628 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 XIRP2A4UGR9 3374 aa21.42■■□□□ 1.02
ITGA6-204ENST00000412899 H3BNC9 293 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 ATP9AO75110 1047 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 RXRAP19793 462 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 TMEM31Q5JXX7 168 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 TAF2Q6P1X5 1199 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 SEPT1Q8WYJ6 367 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 FAM122AQ96E09 287 aa21.41■■□□□ 1.02
ITGA6-204ENST00000412899 SH2B2O14492 632 aaPredicted RBP21.4■■□□□ 1.02
ITGA6-204ENST00000412899 CHRNA1P02708 482 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 CALM1P0DP23 149 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 CALM2P0DP24 149 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 CALM3P0DP25 149 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 PPFIA1Q13136 1202 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 TIGD5Q53EQ6 642 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 RSPH3Q86UC2 560 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 BANK1Q8NDB2 785 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.4■■□□□ 1.02
ITGA6-204ENST00000412899 GLG1Q92896 1179 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 PKD2L1Q9P0L9 805 aa21.4■■□□□ 1.02
ITGA6-204ENST00000412899 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 GHRP10912 638 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 KCNA2P16389 499 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 ITGB5P18084 799 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 MARK3P27448 753 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 PLA2G5P39877 138 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 MTMR1Q13613 665 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 RUFY4Q6ZNE9 571 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 CCDC82Q8N4S0 544 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 FIBCD1Q8N539 461 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 KHSRPQ92945 711 aaKnown RBP eCLIP21.39■■□□□ 1.01
ITGA6-204ENST00000412899 IL17RAQ96F46 866 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 CD320Q9NPF0 282 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 ERAP1Q9NZ08 941 aa21.39■■□□□ 1.01
ITGA6-204ENST00000412899 GSTTP1A0A1W2PQM5 241 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 hCG_1642624A0A1W2PR95 340 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 SLC27A2O14975 620 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 IL9P15248 144 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 LIFRP42702 1097 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 GRIK4Q16099 956 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 UBE2SQ16763 222 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 CREB3L3Q68CJ9 461 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 PTCRAQ6ISU1 281 aaPredicted RBP21.38■■□□□ 1.01
ITGA6-204ENST00000412899 EP400NLQ6ZTU2 488 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 RPAINQ86UA6 219 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 RAB11FIP4Q86YS3 637 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 FAM178BQ8IXR5 827 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 SMARCAD1Q9H4L7 1026 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 TUBE1Q9UJT0 475 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 UBIAD1Q9Y5Z9 338 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 SLC12A7Q9Y666 1083 aa21.38■■□□□ 1.01
ITGA6-204ENST00000412899 NECTIN1Q15223 517 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 GJD3Q8N144 294 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 DNAJB3Q8WWF6 145 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 EHMT1Q9H9B1 1298 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 PCDHA6Q9UN73 950 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 HCN4Q9Y3Q4 1203 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 PCDHA8Q9Y5H6 950 aa21.37■■□□□ 1.01
ITGA6-204ENST00000412899 H3BQ06 376 aaPredicted RBP21.36■■□□□ 1.01
ITGA6-204ENST00000412899 MAFGO15525 162 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 SSTR3P32745 418 aaPredicted RBP21.36■■□□□ 1.01
ITGA6-204ENST00000412899 CTNNB1P35222 781 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 IGBP1P78318 339 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 LPIN1Q14693 890 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 PUS10Q3MIT2 529 aaKnown RBP21.36■■□□□ 1.01
ITGA6-204ENST00000412899 TCEAL5Q5H9L2 206 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 RNF20Q5VTR2 975 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 HEATR3Q7Z4Q2 680 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 NSUN3Q9H649 340 aaKnown RBP21.36■■□□□ 1.01
ITGA6-204ENST00000412899 JADE2Q9NQC1 790 aa21.36■■□□□ 1.01
ITGA6-204ENST00000412899 COL4A6Q14031 1691 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms