RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 H3BRB1 525 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 GAS7O60861 476 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 LGR5O75473 907 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 ZNF286BP0CG31 522 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 PSMC6P62333 389 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 LRCH2Q5VUJ6 765 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 NFRKBQ6P4R8 1299 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 SMAP1Q8IYB5 467 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 HAS1Q92839 578 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 UIMC1Q96RL1 719 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 TEKT3Q9BXF9 490 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 MYH9P35579 1960 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 MROH7Q68CQ1 1323 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
TRAPPC12-203ENST00000411973 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 STX6O43752 255 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 NEMFO60524 1076 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 BAG4O95429 457 aaKnown RBP17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 PSEN2P49810 448 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 RTP1P59025 263 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 PTPN11Q06124 597 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 NBPF20Q3BBV1 942 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 TRIM60Q495X7 471 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 TTC38Q5R3I4 469 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 BRAPQ7Z569 592 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 SESTD1Q86VW0 696 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 GJA10Q969M2 543 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 MTMR9Q96QG7 549 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 MTMR6Q9Y217 621 aa17.44■□□□□ 0.38
TRAPPC12-203ENST00000411973 KAT6AQ92794 2004 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 WDR64B1ANS9 1081 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 EVI5O60447 810 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 ATP2B1P20020 1258 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 SFNP31947 248 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 MCM7P33993 719 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 TLE2Q04725 743 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 MFSD10Q14728 455 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 ZNF174Q15697 407 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 CALCRLQ16602 461 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 PLPPR4Q7Z2D5 763 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 RDM1Q8NG50 284 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 DPF3Q92784 378 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 PCYT2Q99447 389 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 VAV3Q9UKW4 847 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 PCDHA10Q9Y5I2 948 aa17.43■□□□□ 0.38
TRAPPC12-203ENST00000411973 SUPT20HL2P0C7V6 817 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 SLC26A2P50443 739 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 JAK3P52333 1124 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 TRIM50Q86XT4 487 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 FAM126BQ8IXS8 530 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 TMEM60Q9H2L4 133 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 UNC45AQ9H3U1 944 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 DISC1Q9NRI5 854 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 ERAP1Q9NZ08 941 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 ATP11BQ9Y2G3 1177 aa17.42■□□□□ 0.38
TRAPPC12-203ENST00000411973 MARCH6O60337 910 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 CD4P01730 458 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 STAT5BP51692 787 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 RESTQ13127 1097 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 FAM160B1Q5W0V3 765 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 CCDC60Q8IWA6 550 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 C4orf32Q8N8J7 132 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 GLG1Q92896 1179 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 PCDHA12Q9UN75 941 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
TRAPPC12-203ENST00000411973 TRIP12Q14669 1992 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 DCDC2CA8MYV0 355 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 LAD1O00515 517 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 PQBP1O60828 265 aaKnown RBP17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 PSAPP07602 524 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 HOXC8P31273 242 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 NBR1Q14596 966 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 RNPEPQ9H4A4 650 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 ZNF302Q9NR11 478 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 GTF2IRD1Q9UHL9 959 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms