RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
SCFD2-202ENST00000401642 ALS2CR12Q96Q35 445 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 PVALEFA0A1B0GWK0 134 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 FAM86B1E9PN63 330 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 MAP2K7O14733 419 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 RNF40O75150 1001 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 FAM86B2P0C5J1 330 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 CYP11B2P19099 503 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 GGCXP38435 758 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 CASP4P49662 377 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 ABCB5Q2M3G0 1257 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 SH3BP5LQ7L8J4 393 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 CRAMP1Q96RY5 1269 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 PALMO75781 387 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 NDUFB10O96000 172 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 CKAP4Q07065 602 aaKnown RBP12.22□□□□□ -0.45
SCFD2-202ENST00000401642 KCNH2Q12809 1159 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 ZC2HC1CQ53FD0 456 aaPredicted RBP12.22□□□□□ -0.45
SCFD2-202ENST00000401642 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 CSRNP1Q96S65 589 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 OSBPL9Q96SU4 736 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 SELENOOQ9BVL4 669 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 GBP3Q9H0R5 595 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 SH2D4AQ9H788 454 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 RSPH14Q9UHP6 348 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 SNX12Q9UMY4 172 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 BTAF1O14981 1849 aa12.22□□□□□ -0.45
SCFD2-202ENST00000401642 A0A087X0T9 212 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 ESYT2A0FGR8 921 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 RAD17O75943 681 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 FAM228BP0C875 321 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 PDIA5Q14554 519 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 SLC9C1Q4G0N8 1177 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 KCTD16Q68DU8 428 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 CCDC70Q6NSX1 233 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 PDXDC1Q6P996 788 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.45
SCFD2-202ENST00000401642 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 TRIM58Q8NG06 486 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 REEP2Q9BRK0 252 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 DNM3Q9UQ16 869 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 NRAPQ86VF7 1730 aa12.21□□□□□ -0.45
SCFD2-202ENST00000401642 ECE2O60344 883 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 TLR2O60603 784 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 KLRC1P26715 233 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 POLD1P28340 1107 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 PAFAH1B1P43034 410 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 LRRC63Q05C16 580 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 TRADDQ15628 312 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 ARSHQ5FYA8 562 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 LEKR1Q6ZMV7 388 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 ACER1Q8TDN7 264 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 BAP1Q92560 729 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 HOMER2Q9NSB8 354 aa12.21□□□□□ -0.46
SCFD2-202ENST00000401642 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.46
SCFD2-202ENST00000401642 CETN3O15182 167 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 ADRA2BP18089 450 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 PAPD7Q5XG87 772 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 CREG2Q8IUH2 290 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 PRMT6Q96LA8 375 aaPredicted RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 JRKLQ9Y4A0 524 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 COL5A3P25940 1745 aaPredicted RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 MEIS2O14770 477 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 ATP8B1O43520 1251 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 CYP2J2P51589 502 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 C15orf52Q6ZUT6 534 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 C10orf67Q8IYJ2 551 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 RUSC1Q9BVN2 902 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 HDAC9Q9UKV0 1011 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 TRPC5Q9UL62 973 aaPredicted RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 EML1O00423 815 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 RRP1BQ14684 758 aaKnown RBP12.2□□□□□ -0.46
SCFD2-202ENST00000401642 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 MYCT1Q8N699 235 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 ELMO3Q96BJ8 720 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 KRT12Q99456 494 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 EHD4Q9H223 541 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
SCFD2-202ENST00000401642 IGKV6D-41A0A0C4DH26 115 aa12.19□□□□□ -0.46
SCFD2-202ENST00000401642 NOL4O94818 638 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms