RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 BTG3Q14201 252 aaPredicted RBP20.99■□□□□ 0.95
UFD1-202ENST00000399523 NAALADL2Q58DX5 795 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 SAMD3Q8N6K7 520 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 GPKOWQ92917 476 aaPredicted RBP eCLIP20.99■□□□□ 0.953e-7■■□□□ 12.2
UFD1-202ENST00000399523 ASIC4Q96FT7 647 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 FAM227BQ96M60 508 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
UFD1-202ENST00000399523 BCAS3Q9H6U6 928 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 CCDC171Q6TFL3 1326 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 SALL3Q9BXA9 1300 aa20.99■□□□□ 0.95
UFD1-202ENST00000399523 DGKIO75912 1065 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 DNAJB1P25685 340 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 AVPR2P30518 371 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 CCDC178Q5BJE1 867 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 ADGRD2Q7Z7M1 963 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 SPPL3Q8TCT6 385 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 VAT1LQ9HCJ6 419 aa20.98■□□□□ 0.95
UFD1-202ENST00000399523 PLXNA3P51805 1871 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 A0A0D9SFI3 127 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 DHX16O60231 1041 aaKnown RBP20.97■□□□□ 0.95
UFD1-202ENST00000399523 CSPG5O95196 566 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 ITGB1P05556 798 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 NT5C2P49902 561 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 LMBR1Q8WVP7 490 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 ATOH1Q92858 354 aaPredicted RBP20.97■□□□□ 0.95
UFD1-202ENST00000399523 PHF7Q9BWX1 381 aaPredicted RBP20.97■□□□□ 0.95
UFD1-202ENST00000399523 KAT14Q9H8E8 782 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 USP15Q9Y4E8 981 aaPredicted RBP20.97■□□□□ 0.95
UFD1-202ENST00000399523 NEDD4P46934 1319 aa20.97■□□□□ 0.95
UFD1-202ENST00000399523 DCHS1Q96JQ0 3298 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 PROB1E7EW31 1015 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 NOP56O00567 594 aaKnown RBP20.96■□□□□ 0.95
UFD1-202ENST00000399523 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
UFD1-202ENST00000399523 GHRP10912 638 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 CCND2P30279 289 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 LPIN1Q14693 890 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 METTL7BQ6UX53 244 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 ZNF589Q86UQ0 364 aaPredicted RBP20.96■□□□□ 0.95
UFD1-202ENST00000399523 IQCA1Q86XH1 822 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 TICAM2Q86XR7 235 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 RCAN3Q9UKA8 241 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 VPS13AQ96RL7 3174 aa20.96■□□□□ 0.95
UFD1-202ENST00000399523 PPP1R11O60927 126 aaPredicted RBP20.95■□□□□ 0.94
UFD1-202ENST00000399523 GLP2RO95838 553 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 HOXA13P31271 388 aaPredicted RBP20.95■□□□□ 0.94
UFD1-202ENST00000399523 ICAM3P32942 547 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 NUBP1P53384 320 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 ARHGAP4P98171 946 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 CRIPAKQ8N1N5 446 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 MTMR8Q96EF0 704 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 ZFP91Q96JP5 570 aaPredicted RBP20.95■□□□□ 0.94
UFD1-202ENST00000399523 GPR20Q99678 358 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 MRPL42Q9Y6G3 142 aaKnown RBP20.95■□□□□ 0.94
UFD1-202ENST00000399523 GVINP1Q7Z2Y8 2422 aa20.95■□□□□ 0.94
UFD1-202ENST00000399523 ATF7P17544 494 aaPredicted RBP20.94■□□□□ 0.94
UFD1-202ENST00000399523 NRIP1P48552 1158 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 MGAT3Q09327 533 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 NEDD9Q14511 834 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 TRIM50Q86XT4 487 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 CMTR2Q8IYT2 770 aaKnown RBP20.94■□□□□ 0.94
UFD1-202ENST00000399523 ZNF215Q9UL58 517 aaPredicted RBP20.94■□□□□ 0.94
UFD1-202ENST00000399523 BARX2Q9UMQ3 279 aaPredicted RBP20.94■□□□□ 0.94
UFD1-202ENST00000399523 NRCAMQ92823 1304 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 KIAA1671Q9BY89 1806 aa20.94■□□□□ 0.94
UFD1-202ENST00000399523 DOCK5Q9H7D0 1870 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 TAF2Q6P1X5 1199 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 ENAHQ8N8S7 591 aaPredicted RBP20.93■□□□□ 0.94
UFD1-202ENST00000399523 KLHL23Q8NBE8 558 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 SUSD6Q92537 303 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 RPGRIP1Q96KN7 1286 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 ZSCAN10Q96SZ4 725 aaPredicted RBP20.93■□□□□ 0.94
UFD1-202ENST00000399523 PCDHA1Q9Y5I3 950 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 DMDP11532 3685 aa20.93■□□□□ 0.94
UFD1-202ENST00000399523 SPATA31C2B4DYI2 1134 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 ZBTB5O15062 677 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 KDM4AO75164 1064 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 GNPTABQ3T906 1256 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 FBXO47Q5MNV8 452 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 RUFY4Q6ZNE9 571 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 CYFIP1Q7L576 1253 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 POF1BQ8WVV4 589 aa20.92■□□□□ 0.94
UFD1-202ENST00000399523 INPP4AQ96PE3 977 aaPredicted RBP20.92■□□□□ 0.94
UFD1-202ENST00000399523 SUPT16HQ9Y5B9 1047 aaKnown RBP20.92■□□□□ 0.94
UFD1-202ENST00000399523 H0Y858 1186 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 GCOM1H8Y6P7 765 aaPredicted RBP20.91■□□□□ 0.94
UFD1-202ENST00000399523 STAM2O75886 525 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 POLR2MP0CAP2 368 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 MRPS9P82933 396 aaKnown RBP20.91■□□□□ 0.94
UFD1-202ENST00000399523 SEMA3FQ13275 785 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 RBM23Q86U06 439 aaKnown RBP20.91■□□□□ 0.94
UFD1-202ENST00000399523 STAG2Q8N3U4 1231 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 ATP8B4Q8TF62 1192 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 LINC01599Q8WXQ3 324 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 TLR9Q9NR96 1032 aa20.91■□□□□ 0.94
UFD1-202ENST00000399523 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
UFD1-202ENST00000399523 TRIM6-TRIM34B2RNG4 842 aa20.9■□□□□ 0.94
UFD1-202ENST00000399523 ZNF213O14771 459 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms