RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SCLYQ96I15 445 aa16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
HLA-DQB1-202ENST00000399079 RBAK-RBAKDNI3L0D1 243 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 IPO5O00410 1097 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 DHX15O43143 795 aaKnown RBP16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ACRP10323 421 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 XBP1P17861 261 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CIITAP33076 1130 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 RABEP1Q15276 862 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 GALNT17Q6IS24 598 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 FAM177A1Q8N128 213 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TMEM199Q8N511 208 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 WASF1Q92558 559 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LENG9Q96B70 501 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 RNPEPQ9H4A4 650 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 NFASCO94856 1347 aa16.02■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SMIM10L2AP0DMW4 78 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SMIM10L2BP0DMW5 78 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 USP11P51784 963 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ACTR2P61160 394 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 INF2Q27J81 1249 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 PCYT2Q99447 389 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ZNF577Q9BSK1 485 aa16.01■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CCNE2O96020 404 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 MARK3P27448 753 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SETQ01105 290 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 EARS2Q5JPH6 523 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 DHX38Q92620 1227 aaKnown RBP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 GLG1Q92896 1179 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 GJA10Q969M2 543 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LRCH3Q96II8 777 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 BUD13Q9BRD0 619 aaKnown RBP eCLIP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 BACH2Q9BYV9 841 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SETD4Q9NVD3 440 aa16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TDP2O95551 362 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 NR5A1Q13285 461 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 PPIGQ13427 754 aaKnown RBP eCLIP15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 NONOQ15233 471 aaKnown RBP eCLIP15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 KRT25Q7Z3Z0 450 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 WNT8BQ93098 351 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SH2B1Q9NRF2 756 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 C17orf102A2RUQ5 167 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 MSH4O15457 936 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TREHO43280 583 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ST18O60284 1047 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 HOXC8P31273 242 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LRIT3Q3SXY7 679 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 KRT40Q6A162 431 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ATP6V0A1Q93050 837 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 VWCEQ96DN2 955 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SMARCAD1Q9H4L7 1026 aa15.99■□□□□ 0.15
HLA-DQB1-202ENST00000399079 EMSYQ7Z589 1322 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LGR5O75473 907 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ATG7O95352 703 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 MMP1P03956 469 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 GUCY1B3Q02153 619 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 BFSP2Q13515 415 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LETM2Q2VYF4 491 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TMEM240Q5SV17 173 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ABHD15Q6UXT9 468 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ZNF365Q70YC5 407 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 DEFB128Q7Z7B8 93 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LLPHQ9BRT6 129 aaKnown RBP15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 IL23AQ9NPF7 189 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TBC1D22BQ9NU19 505 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ERAP1Q9NZ08 941 aa15.98■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TRIP12Q14669 1992 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CYP3A7-CYP3A51PA0A087WV96 503 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 BTBD18B2RXH4 712 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 IQCF3P0C7M6 154 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CYP3A7P24462 503 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 KRT2P35908 639 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 PTK7Q13308 1070 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SERINC5Q86VE9 423 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 RETREG2Q8NC44 543 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 LMBR1Q8WVP7 490 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TNFRSF25Q93038 417 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
HLA-DQB1-202ENST00000399079 SLC37A4O43826 429 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CKBP12277 381 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 STAT5BP51692 787 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 ADAM17P78536 824 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TRIM29Q14134 588 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 TRIM71Q2Q1W2 868 aaKnown RBP15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 Q4G0T1 1027 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 OTOP2Q7RTS6 562 aa15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CCDC60Q8IWA6 550 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 DIS3L2Q8IYB7 885 aaKnown RBP15.96■□□□□ 0.15
HLA-DQB1-202ENST00000399079 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms