RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
CAPN3-207ENST00000397200 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
CAPN3-207ENST00000397200 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 HSD3B7Q9H2F3 369 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 KCNH7Q9NS40 1196 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 MAN1B1Q9UKM7 699 aa16.72■□□□□ 0.27
CAPN3-207ENST00000397200 FOXN1O15353 648 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 SNAI1O95863 264 aaPredicted RBP16.71■□□□□ 0.27
CAPN3-207ENST00000397200 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 BMP6P22004 513 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 PRMT2P55345 433 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 RAET1EQ8TD07 263 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 HAS1Q92839 578 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 FAM20AQ96MK3 541 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 MTMR9Q96QG7 549 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 TRIM17Q9Y577 477 aa16.71■□□□□ 0.27
CAPN3-207ENST00000397200 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 PTGS1P23219 599 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 ICAM3P32942 547 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 TXKP42681 527 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 MYL5Q02045 173 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 MORC3Q14149 939 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 E2F4Q16254 413 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 KCNV1Q6PIU1 500 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 DTHD1Q6ZMT9 781 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 PYM1Q9BRP8 204 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 AGO4Q9HCK5 861 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 IPO5O00410 1097 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 HSPA8P11142 646 aaKnown RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 CYP2C19P33261 490 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 TPM4P67936 248 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 IL17AQ16552 155 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 MFSD14CQ5VZR4 134 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 OTOP1Q7RTM1 612 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 TRIB2Q92519 343 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 GJA10Q969M2 543 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 CCDC34Q96HJ3 373 aa16.7■□□□□ 0.26
CAPN3-207ENST00000397200 ZHX1Q9UKY1 873 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-207ENST00000397200 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 ADCY3O60266 1144 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 IGHA2P01877 340 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 TGFB3P10600 412 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 LONP1P36776 959 aaKnown RBP16.69■□□□□ 0.26
CAPN3-207ENST00000397200 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 CT47A1Q5JQC4 288 aaPredicted RBP16.69■□□□□ 0.26
CAPN3-207ENST00000397200 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 SCFD2Q8WU76 684 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 SMARCE1Q969G3 411 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 PCDHA12Q9UN75 941 aa16.69■□□□□ 0.26
CAPN3-207ENST00000397200 GAS7O60861 476 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-207ENST00000397200 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 RIT2Q99578 217 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 TBC1D22BQ9NU19 505 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 NRBP1Q9UHY1 535 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 PYCARDQ9ULZ3 195 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 DOCK5Q9H7D0 1870 aa16.68■□□□□ 0.26
CAPN3-207ENST00000397200 ATP9AO75110 1047 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 ELNP15502 786 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 KCNA2P16389 499 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 TECP42680 631 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 ITGB3BPQ13352 177 aaPredicted RBP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PRAMEF19Q5SWL8 479 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PDXDC2PQ6P474 469 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PDILTQ8N807 584 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 DHX58Q96C10 678 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 RAB34Q9BZG1 259 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 RBM47A0AV96 593 aaKnown RBP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 PSMD10O75832 226 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 SMC2O95347 1197 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 HMGCRP04035 888 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 TXNP10599 105 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms