RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 MARCH8Q5T0T0 291 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 PLA2G4DQ86XP0 818 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 U2AF1L4Q8WU68 220 aaKnown RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 GJA10Q969M2 543 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 ABHD8Q96I13 439 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 MICAL3Q7RTP6 2002 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 EVPLQ92817 2033 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 MBLAC1A4D2B0 266 aaPredicted RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 TXNP10599 105 aaKnown RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
NUP98-205ENST00000397007 SRPRBQ9Y5M8 271 aaKnown RBP12.01□□□□□ -0.49
NUP98-205ENST00000397007 IGKV6-21A0A0C4DH24 114 aa12□□□□□ -0.49
NUP98-205ENST00000397007 ZNF862O60290 1169 aa12□□□□□ -0.49
NUP98-205ENST00000397007 NEMFO60524 1076 aa12□□□□□ -0.49
NUP98-205ENST00000397007 CCNT1O60563 726 aaKnown RBP12□□□□□ -0.49
NUP98-205ENST00000397007 TRIM71Q2Q1W2 868 aaKnown RBP12□□□□□ -0.49
NUP98-205ENST00000397007 SLFN12Q8IYM2 578 aa12□□□□□ -0.49
NUP98-205ENST00000397007 JPH1Q9HDC5 661 aaPredicted RBP12□□□□□ -0.49
NUP98-205ENST00000397007 HPSEQ9Y251 543 aa12□□□□□ -0.49
NUP98-205ENST00000397007 UGCGQ16739 394 aa12□□□□□ -0.49
NUP98-205ENST00000397007 ANO1Q5XXA6 986 aa12□□□□□ -0.49
NUP98-205ENST00000397007 ANKRD33Q7Z3H0 272 aa12□□□□□ -0.49
NUP98-205ENST00000397007 RPAINQ86UA6 219 aa12□□□□□ -0.49
NUP98-205ENST00000397007 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
NUP98-205ENST00000397007 NIFKQ9BYG3 293 aaKnown RBP12□□□□□ -0.49
NUP98-205ENST00000397007 PPFIA4O75335 1185 aa12□□□□□ -0.49
NUP98-205ENST00000397007 SUPT20HL2P0C7V6 817 aa12□□□□□ -0.49
NUP98-205ENST00000397007 PTGDRQ13258 359 aa12□□□□□ -0.49
NUP98-205ENST00000397007 PRR16Q569H4 304 aa12□□□□□ -0.49
NUP98-205ENST00000397007 FAM173BQ6P4H8 233 aa12□□□□□ -0.49
NUP98-205ENST00000397007 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
NUP98-205ENST00000397007 SEZ6LQ9BYH1 1024 aa12□□□□□ -0.49
NUP98-205ENST00000397007 SLITRK3O94933 977 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 GGPS1O95749 300 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 OR52Z1P0C646 297 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
NUP98-205ENST00000397007 ACTR2P61160 394 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 KRT76Q01546 638 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
NUP98-205ENST00000397007 E2F4Q16254 413 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 LETM2Q2VYF4 491 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 CCDC60Q8IWA6 550 aaPredicted RBP11.99□□□□□ -0.49
NUP98-205ENST00000397007 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 SLC9A2Q9UBY0 812 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 KAT6AQ92794 2004 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 KPNA6O60684 536 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
NUP98-205ENST00000397007 WDR78Q5VTH9 848 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 CNNM4Q6P4Q7 775 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 SEPT14Q6ZU15 432 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 PNMA5Q96PV4 448 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 XPNPEP3Q9NQH7 507 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 COL1A2P08123 1366 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 SFNP31947 248 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
NUP98-205ENST00000397007 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
NUP98-205ENST00000397007 A0A1W2PQ45 241 aaPredicted RBP11.98□□□□□ -0.49
NUP98-205ENST00000397007 A0A1W2PQY0 241 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 LGALS2P05162 132 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 SF3A1Q15459 793 aaKnown RBP11.98□□□□□ -0.49
NUP98-205ENST00000397007 CYFIP1Q7L576 1253 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 ACLYP53396 1101 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 NUCB2P80303 420 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 NAALADL2Q58DX5 795 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 A0A087X0B3 334 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 BMP15O95972 392 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 RARBP10826 455 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 CPT1AP50416 773 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 EPHA7Q15375 998 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 KCNA10Q16322 511 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 CALCRLQ16602 461 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 EEPD1Q7L9B9 569 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 CCSER1Q9C0I3 900 aa11.98□□□□□ -0.49
NUP98-205ENST00000397007 SLC26A2P50443 739 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 JAK3P52333 1124 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
NUP98-205ENST00000397007 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
NUP98-205ENST00000397007 RPA1P27694 616 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 FOSBP53539 338 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 ZNF174Q15697 407 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 NFRKBQ6P4R8 1299 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 SHC4Q6S5L8 630 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 DIS3LQ8TF46 1054 aaKnown RBP11.97□□□□□ -0.49
NUP98-205ENST00000397007 MED24O75448 989 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 PLCB4Q15147 1175 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 AK8Q96MA6 479 aa11.97□□□□□ -0.49
NUP98-205ENST00000397007 DEFB118Q96PH6 123 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms