RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 SETD4Q9NVD3 440 aa25.38■■□□□ 1.65
PARD6B-202ENST00000396039 CTSHP09668 335 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 PTPROQ16827 1216 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 FAM26DQ5JW98 314 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 RPAINQ86UA6 219 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 RSPH3Q86UC2 560 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 LMBR1Q8WVP7 490 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 YME1L1Q96TA2 773 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 LSG1Q9H089 658 aaKnown RBP25.37■■□□□ 1.65
PARD6B-202ENST00000396039 BCAS3Q9H6U6 928 aa25.37■■□□□ 1.65
PARD6B-202ENST00000396039 PLEKHA8P1O95397 391 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 COL9A1P20849 921 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 TCF7P36402 384 aaPredicted RBP25.36■■□□□ 1.65
PARD6B-202ENST00000396039 ADAM17P78536 824 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 SP4Q02446 784 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 RNF20Q5VTR2 975 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 SYNE3Q6ZMZ3 975 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 TRIM50Q86XT4 487 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 SRBD1Q8N5C6 995 aaKnown RBP25.36■■□□□ 1.65
PARD6B-202ENST00000396039 TOP1MTQ969P6 601 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 ESYT1Q9BSJ8 1104 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 ERAP1Q9NZ08 941 aa25.36■■□□□ 1.65
PARD6B-202ENST00000396039 SLC27A2O14975 620 aa25.35■■□□□ 1.65
PARD6B-202ENST00000396039 SEPT1Q8WYJ6 367 aa25.35■■□□□ 1.65
PARD6B-202ENST00000396039 TNPO1Q92973 898 aaKnown RBP25.35■■□□□ 1.65
PARD6B-202ENST00000396039 IFIH1Q9BYX4 1025 aaKnown RBP25.35■■□□□ 1.65
PARD6B-202ENST00000396039 KCNA2P16389 499 aa25.34■■□□□ 1.65
PARD6B-202ENST00000396039 MTMR1Q13613 665 aa25.34■■□□□ 1.65
PARD6B-202ENST00000396039 CREB3L3Q68CJ9 461 aa25.34■■□□□ 1.65
PARD6B-202ENST00000396039 SGMS1Q86VZ5 419 aa25.34■■□□□ 1.65
PARD6B-202ENST00000396039 NECAB3Q96P71 396 aaPredicted RBP25.34■■□□□ 1.65
PARD6B-202ENST00000396039 PPFIA1Q13136 1202 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 NECTIN1Q15223 517 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 TIGD5Q53EQ6 642 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 TMTC3Q6ZXV5 915 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 FANCBQ8NB91 859 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 C17orf80Q9BSJ5 609 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 ANO2Q9NQ90 1003 aa25.33■■□□□ 1.65
PARD6B-202ENST00000396039 RBM28Q9NW13 759 aaKnown RBP25.33■■□□□ 1.65
PARD6B-202ENST00000396039 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
PARD6B-202ENST00000396039 MRPL38Q96DV4 380 aaKnown RBP25.32■■□□□ 1.64
PARD6B-202ENST00000396039 UBE2ZQ9H832 354 aaPredicted RBP25.32■■□□□ 1.64
PARD6B-202ENST00000396039 UBIAD1Q9Y5Z9 338 aa25.32■■□□□ 1.64
PARD6B-202ENST00000396039 ITGB5P18084 799 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 RXRAP19793 462 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 EPC2Q52LR7 807 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 PPP1R18Q6NYC8 613 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 HEATR3Q7Z4Q2 680 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 MICU3Q86XE3 530 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 GLG1Q92896 1179 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 TUBE1Q9UJT0 475 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 PCDHA6Q9UN73 950 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 RWDD3Q9Y3V2 267 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 PCDHA8Q9Y5H6 950 aa25.31■■□□□ 1.64
PARD6B-202ENST00000396039 hCG_1984214I3L0E3 225 aa25.3■■□□□ 1.64
PARD6B-202ENST00000396039 CMTR1Q8N1G2 835 aaKnown RBP25.3■■□□□ 1.64
PARD6B-202ENST00000396039 ZNF713Q8N859 430 aaPredicted RBP25.3■■□□□ 1.64
PARD6B-202ENST00000396039 JADE2Q9NQC1 790 aa25.3■■□□□ 1.64
PARD6B-202ENST00000396039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.29■■□□□ 1.64
PARD6B-202ENST00000396039 RRN3P2A6NIE6 340 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 H3BNC9 293 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 ATP9AO75110 1047 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 UPP2O95045 317 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 GRIK4Q16099 956 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 UBE2SQ16763 222 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 GLT8D2Q9H1C3 349 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 AZI2Q9H6S1 392 aa25.29■■□□□ 1.64
PARD6B-202ENST00000396039 JPH1Q9HDC5 661 aaPredicted RBP25.29■■□□□ 1.64
PARD6B-202ENST00000396039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.28■■□□□ 1.64
PARD6B-202ENST00000396039 GSTTP1A0A1W2PQM5 241 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 MBLAC1A4D2B0 266 aaPredicted RBP25.28■■□□□ 1.64
PARD6B-202ENST00000396039 FOSP01100 380 aaPredicted RBP25.28■■□□□ 1.64
PARD6B-202ENST00000396039 PUS10Q3MIT2 529 aaKnown RBP25.28■■□□□ 1.64
PARD6B-202ENST00000396039 LEXMQ3ZCV2 418 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 BMP2KLQ5H9B9 411 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 TMEM192Q8IY95 271 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 CCDC82Q8N4S0 544 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 IL17RAQ96F46 866 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 SDF4Q9BRK5 362 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 TTC3P53804 2025 aa25.28■■□□□ 1.64
PARD6B-202ENST00000396039 CHRNA1P02708 482 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 GPM6BQ13491 265 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 APOA5Q6Q788 366 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 FIBCD1Q8N539 461 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 SLC9A2Q9UBY0 812 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 NFASCO94856 1347 aa25.27■■□□□ 1.64
PARD6B-202ENST00000396039 LOXHD1Q8IVV2 1947 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 M0QZ92 97 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 GHRP10912 638 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 MARK3P27448 753 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 NAPAP54920 295 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 MGAT3Q09327 533 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 TSHZ1Q6ZSZ6 1077 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 FAM43BQ6ZT52 329 aaPredicted RBP25.26■■□□□ 1.63
PARD6B-202ENST00000396039 NEK1Q96PY6 1258 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 MXRA8Q9BRK3 442 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 LRRC2Q9BYS8 371 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 RIC8AQ9NPQ8 531 aa25.26■■□□□ 1.63
PARD6B-202ENST00000396039 TELO2Q9Y4R8 837 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms