RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 LRRC2Q9BYS8 371 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 BCAS3Q9H6U6 928 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 SEC63Q9UGP8 760 aaKnown RBP15.59■□□□□ 0.09
SCAF11-203ENST00000395453 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
SCAF11-203ENST00000395453 PARNO95453 639 aaKnown RBP15.58■□□□□ 0.08
SCAF11-203ENST00000395453 ZNF286BP0CG31 522 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 RXRAP19793 462 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 SEMA3FQ13275 785 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 PUS10Q3MIT2 529 aaKnown RBP15.58■□□□□ 0.08
SCAF11-203ENST00000395453 GNPTABQ3T906 1256 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 PCNX4Q63HM2 1172 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 PTCRAQ6ISU1 281 aaPredicted RBP15.58■□□□□ 0.08
SCAF11-203ENST00000395453 XRRA1Q6P2D8 792 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 C7orf31Q8N865 590 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 NEK1Q96PY6 1258 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 ALG1Q9BT22 464 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 SCUBE2Q9NQ36 999 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 MTUS1Q9ULD2 1270 aa15.58■□□□□ 0.08
SCAF11-203ENST00000395453 DCXO43602 365 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 EFCAB14O75071 495 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 GJB5O95377 273 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 IL9P15248 144 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 DEFB103AP81534 67 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 CNKSR3Q6P9H4 555 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 TMCO2Q7Z6W1 182 aaPredicted RBP15.57■□□□□ 0.08
SCAF11-203ENST00000395453 SMARCC2Q8TAQ2 1214 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 CUL5Q93034 780 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 MLXIPQ9HAP2 919 aa15.57■□□□□ 0.08
SCAF11-203ENST00000395453 ABHD14A-ACY1A0A1B0GW23 586 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 GRXCR2A6NFK2 248 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 FIBPO43427 364 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 SORBS3O60504 671 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 CDC45O75419 566 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 CKBP12277 381 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 SELPP16109 830 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 HOXC8P31273 242 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 PTK7Q13308 1070 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 NEDD9Q14511 834 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 HIC1Q14526 733 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 TRIM71Q2Q1W2 868 aaKnown RBP15.56■□□□□ 0.08
SCAF11-203ENST00000395453 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 APOA5Q6Q788 366 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 METTL7BQ6UX53 244 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 LRRC8DQ7L1W4 858 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
SCAF11-203ENST00000395453 FBXL18Q96ME1 805 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 SENP7Q9BQF6 1050 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SCAF11-203ENST00000395453 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 LINC01553A4QN01 128 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 H3BRB1 525 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 CXCL10P02778 98 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-203ENST00000395453 FUT2Q10981 343 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 TRAF7Q6Q0C0 670 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 CYFIP1Q7L576 1253 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 RAB11FIP4Q86YS3 637 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 CCDC82Q8N4S0 544 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 KCNB2Q92953 911 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 SNX27Q96L92 541 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 USP26Q9BXU7 913 aa15.55■□□□□ 0.08
SCAF11-203ENST00000395453 TUT1Q9H6E5 874 aaKnown RBP15.55■□□□□ 0.08
SCAF11-203ENST00000395453 DOCK5Q9H7D0 1870 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 hCG_1642624A0A1W2PR95 340 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 LGALS2P05162 132 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 IKBKEQ14164 716 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 KRT32Q14532 448 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 SYNE3Q6ZMZ3 975 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 MICU3Q86XE3 530 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 WNT8BQ93098 351 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 GPR20Q99678 358 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
SCAF11-203ENST00000395453 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 FAM50BQ9Y247 325 aa15.54■□□□□ 0.08
SCAF11-203ENST00000395453 NBNO60934 754 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 PTPROQ16827 1216 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 ZNF618Q5T7W0 954 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 SERINC5Q86VE9 423 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 NEK9Q8TD19 979 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 GPRASP2Q96D09 838 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 MRPL38Q96DV4 380 aaKnown RBP15.53■□□□□ 0.08
SCAF11-203ENST00000395453 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 FAM217BQ9NTX9 383 aaPredicted RBP15.53■□□□□ 0.08
SCAF11-203ENST00000395453 TRPC6Q9Y210 931 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 INSL6Q9Y581 213 aa15.53■□□□□ 0.08
SCAF11-203ENST00000395453 NOP56O00567 594 aaKnown RBP15.52■□□□□ 0.08
SCAF11-203ENST00000395453 HMGB1P09429 215 aaKnown RBP15.52■□□□□ 0.08
SCAF11-203ENST00000395453 ITGB5P18084 799 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 RCAN1P53805 252 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 MBTPS1Q14703 1052 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 NLRX1Q86UT6 975 aa15.52■□□□□ 0.08
SCAF11-203ENST00000395453 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
SCAF11-203ENST00000395453 RNPEPQ9H4A4 650 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms