RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 TRIM50Q86XT4 487 aa20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 MRPL38Q96DV4 380 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
SNRPA1-202ENST00000394082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 TCF7P36402 384 aaPredicted RBP20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 ARHGAP4P98171 946 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 NECTIN1Q15223 517 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 PTPROQ16827 1216 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 EPC2Q52LR7 807 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 YME1L1Q96TA2 773 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 C17orf80Q9BSJ5 609 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 IFIH1Q9BYX4 1025 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 ERAP1Q9NZ08 941 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 UBIAD1Q9Y5Z9 338 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 SLC12A7Q9Y666 1083 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 DOCK5Q9H7D0 1870 aa20.09■□□□□ 0.81
SNRPA1-202ENST00000394082 BRWD1Q9NSI6 2320 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 MBLAC1A4D2B0 266 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 H3BNC9 293 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 SLC27A2O14975 620 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 CTSHP09668 335 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 ITGB5P18084 799 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 LEXMQ3ZCV2 418 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 UTP14CQ5TAP6 766 aaKnown RBP20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 FANCBQ8NB91 859 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 UBE2ZQ9H832 354 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 EHMT1Q9H9B1 1298 aa20.08■□□□□ 0.81
SNRPA1-202ENST00000394082 KAT6AQ92794 2004 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 SPDYE3A6NKU9 549 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 ATP9AO75110 1047 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 CHRNA1P02708 482 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 MTMR1Q13613 665 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 TMTC3Q6ZXV5 915 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 RSPH3Q86UC2 560 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 ESYT1Q9BSJ8 1104 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 OSBPL7Q9BZF2 842 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 SMARCAD1Q9H4L7 1026 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 JADE2Q9NQC1 790 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 TELO2Q9Y4R8 837 aa20.07■□□□□ 0.8
SNRPA1-202ENST00000394082 GSTTP1A0A1W2PQM5 241 aa20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 MGAT3Q09327 533 aa20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 TIGD5Q53EQ6 642 aa20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 FAM43BQ6ZT52 329 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 ARIH1Q9Y4X5 557 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-202ENST00000394082 C5orf67F2Z3F1 127 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 SP4Q02446 784 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 PPFIA1Q13136 1202 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 COL19A1Q14993 1142 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 PUS10Q3MIT2 529 aaKnown RBP20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 TMEM192Q8IY95 271 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 TUBE1Q9UJT0 475 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 PCDHA6Q9UN73 950 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 RWDD3Q9Y3V2 267 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 PCDHA8Q9Y5H6 950 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 SQORQ9Y6N5 450 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 RALGAPA2Q2PPJ7 1873 aa20.05■□□□□ 0.8
SNRPA1-202ENST00000394082 RRN3P2A6NIE6 340 aa20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 RB1P06400 928 aa20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 GRIK4Q16099 956 aa20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 RNF20Q5VTR2 975 aa20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 CMTR1Q8N1G2 835 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 IL17RAQ96F46 866 aa20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 RBM28Q9NW13 759 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-202ENST00000394082 UPP2O95045 317 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 FOSP01100 380 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 RXRAP19793 462 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 GPM6BQ13491 265 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 MARCH8Q5T0T0 291 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 PPP1R18Q6NYC8 613 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 RUFY4Q6ZNE9 571 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 BANK1Q8NDB2 785 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 NEK9Q8TD19 979 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 GLG1Q92896 1179 aa20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 RC3H2Q9HBD1 1191 aaKnown RBP20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 JPH1Q9HDC5 661 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-202ENST00000394082 NFASCO94856 1347 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 NCK2O43639 380 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 LPIN1Q14693 890 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 UBE2SQ16763 222 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 TSGA10IPQ3SY00 556 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 FBXO47Q5MNV8 452 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 TSHZ1Q6ZSZ6 1077 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 PLPPR4Q7Z2D5 763 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 FIBCD1Q8N539 461 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 CLP1Q92989 425 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 MXRA8Q9BRK3 442 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 LMAN2LQ9H0V9 348 aa20.02■□□□□ 0.8
SNRPA1-202ENST00000394082 KCNH7Q9NS40 1196 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms