RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 IL31RAQ8NI17 732 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 ZNF689Q96CS4 500 aaPredicted RBP11.22□□□□□ -0.61
IFT88-203ENST00000389373 RIPOR3Q96MK2 946 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 TLE6Q9H808 572 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
IFT88-203ENST00000389373 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
IFT88-203ENST00000389373 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
IFT88-203ENST00000389373 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 DGKIO75912 1065 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 GLP2RO95838 553 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 TGFB3P10600 412 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 CCND2P30279 289 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 HOXC8P31273 242 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 ICAM3P32942 547 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 ID4P47928 161 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 RBM10P98175 930 aaKnown RBP11.21□□□□□ -0.61
IFT88-203ENST00000389373 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 SPOUT1Q5T280 376 aaKnown RBP11.21□□□□□ -0.61
IFT88-203ENST00000389373 C20orf194Q5TEA3 1177 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 P2RX5Q93086 422 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 USP26Q9BXU7 913 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
IFT88-203ENST00000389373 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.62
IFT88-203ENST00000389373 PRR23AA6NEV1 266 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
IFT88-203ENST00000389373 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
IFT88-203ENST00000389373 HSD17B4P51659 736 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 LPIN1Q14693 890 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 NAALADL2Q58DX5 795 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 DGKHQ86XP1 1220 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 TBC1D10CQ8IV04 446 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 LMBR1Q8WVP7 490 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 ESR2Q92731 530 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 RC3H2Q9HBD1 1191 aaKnown RBP11.2□□□□□ -0.62
IFT88-203ENST00000389373 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
IFT88-203ENST00000389373 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
IFT88-203ENST00000389373 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 OPLAHO14841 1288 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 MX1P20591 662 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 GATMP50440 423 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 ERMP1Q7Z2K6 904 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
IFT88-203ENST00000389373 DNAJB3Q8WWF6 145 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 GPR20Q99678 358 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 RNF41Q9H4P4 317 aaPredicted RBP11.19□□□□□ -0.62
IFT88-203ENST00000389373 EHMT1Q9H9B1 1298 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
IFT88-203ENST00000389373 NEDD4P46934 1319 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
IFT88-203ENST00000389373 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 STAG3L1P0CL83 205 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
IFT88-203ENST00000389373 CD52P31358 61 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 TECP42680 631 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 IGBP1P78318 339 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 ADAM17P78536 824 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 MGAT3Q09327 533 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 NEDD9Q14511 834 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 GNPTABQ3T906 1256 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 TSHZ1Q6ZSZ6 1077 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 FRMD5Q7Z6J6 570 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
IFT88-203ENST00000389373 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 STAG2Q8N3U4 1231 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 EVI5LQ96CN4 794 aa11.18□□□□□ -0.62
IFT88-203ENST00000389373 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
IFT88-203ENST00000389373 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms