RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 MEIS2O14770 477 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 PRPF6O94906 941 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 SFMBT2Q5VUG0 894 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 SLFN13Q68D06 897 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 TLR10Q9BXR5 811 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 FAM204AQ9H8W3 233 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 DMGDHQ9UI17 866 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 SLX4Q8IY92 1834 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 CASP5P51878 434 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 SLC12A3P55017 1021 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 MARSP56192 900 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 SPIRE1Q08AE8 756 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 KLHDC7AQ5VTJ3 777 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 AENQ8WTP8 325 aaKnown RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 CCDC17Q96LX7 622 aa21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 CYP3A7-CYP3A51PA0A087WV96 503 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 FRMD3A2A2Y4 597 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 TCP1P17987 556 aaKnown RBP21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 CYP3A7P24462 503 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 RXRBP28702 533 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 MATR3P43243 847 aaKnown RBP eCLIP21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 USP11P51784 963 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 ZC3H3Q8IXZ2 948 aaKnown RBP21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 DHX36Q9H2U1 1008 aaKnown RBP21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 ZHX3Q9H4I2 956 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 EMILIN3Q9NT22 766 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 SERPING1P05155 500 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 CAPN2P17655 700 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 ACTN2P35609 894 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 ITIH3Q06033 890 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 SLC9C1Q4G0N8 1177 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 SH3BP5LQ7L8J4 393 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 SIAH1Q8IUQ4 282 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 GOLGA5Q8TBA6 731 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 ETNPPLQ8TBG4 499 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 DCAF4Q8WV16 495 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 CRYGNQ8WXF5 182 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 DBNDD1Q9H9R9 158 aa21.52■■□□□ 1.04
SHROOM1-202ENST00000378676 PSMC6P62333 389 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 TULP2O00295 520 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 KRT18P05783 430 aaKnown RBP21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 HMGB2P26583 209 aaKnown RBP21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 ARHGAP4P98171 946 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 SLC7A5Q01650 507 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 RAPGEF1Q13905 1077 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 ARHGAP27Q6ZUM4 889 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 SYN2Q92777 582 aaPredicted RBP21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 MKL1Q969V6 931 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 NOX5Q96PH1 765 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 GANQ9H2C0 597 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM198AQ9UFP1 575 aa21.51■■□□□ 1.03
SHROOM1-202ENST00000378676 AGPSO00116 658 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 MEIS1O00470 390 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 GNA14O95837 355 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 CERKLQ49MI3 558 aaPredicted RBP21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 PRR16Q569H4 304 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 HAUS3Q68CZ6 603 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 CATSPER3Q86XQ3 398 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 KIAA0825Q8IV33 1275 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 GLT8D2Q9H1C3 349 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 NYAP2Q9P242 653 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 G3V3G9 751 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 NPR1P16066 1061 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 GGCXP38435 758 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 ARID5AQ03989 594 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 ADAM9Q13443 819 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 DCAF8Q5TAQ9 597 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 LENG9Q96B70 501 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 MS4A14Q96JA4 679 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 ZDHHC15Q96MV8 337 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM184BQ9ULE4 1060 aa21.5■■□□□ 1.03
SHROOM1-202ENST00000378676 RBBP6Q7Z6E9 1792 aaKnown RBP21.49■■□□□ 1.03
SHROOM1-202ENST00000378676 CCDC181Q5TID7 509 aa21.49■■□□□ 1.03
SHROOM1-202ENST00000378676 SLFN12Q8IYM2 578 aa21.49■■□□□ 1.03
SHROOM1-202ENST00000378676 TBC1D5Q92609 795 aa21.49■■□□□ 1.03
SHROOM1-202ENST00000378676 NUCKS1Q9H1E3 243 aaKnown RBP21.49■■□□□ 1.03
SHROOM1-202ENST00000378676 PITPNM2Q9BZ72 1349 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 GDF11O95390 407 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 NAP1L1P55209 391 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 PABPC4Q13310 644 aaKnown RBP eCLIP21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 AP3B2Q13367 1082 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 GIT2Q14161 759 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 ENOX2Q16206 610 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 USH1GQ495M9 461 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 CCDC70Q6NSX1 233 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 MOXD1Q6UVY6 613 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM133AQ8N9E0 248 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 PACSIN1Q9BY11 444 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 TSPYL1Q9H0U9 437 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 RBM12Q9NTZ6 932 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 A0A087X0T9 212 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 FAM228BP0C875 321 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 SPATA31C1P0DKV0 1188 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 NR2F2P24468 414 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 KLRC1P26715 233 aa21.48■■□□□ 1.03
SHROOM1-202ENST00000378676 HOXD13P35453 343 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 832 ms