RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PRRC2BQ5JSZ5 2229 aaKnown RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 RBAK-RBAKDNI3L0D1 243 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 FIBPO43427 364 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 PFKFB2O60825 505 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 AMHP03971 560 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 KCNQ1P51787 676 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 RCAN1P53805 252 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 GPNMBQ14956 572 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 TCTN1Q2MV58 587 aa15.72■□□□□ 0.11
PRPF18-202ENST00000378572 TRIM71Q2Q1W2 868 aaKnown RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 ZNF215Q9UL58 517 aaPredicted RBP15.72■□□□□ 0.11
PRPF18-202ENST00000378572 STAM2O75886 525 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 GJB5O95377 273 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 USP17L6PQ6QN14 398 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 METTL7BQ6UX53 244 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 SERINC5Q86VE9 423 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 TRIM50Q86XT4 487 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 GTF3C6Q969F1 213 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 RAD9AQ99638 391 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 C16orf70Q9BSU1 422 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.71■□□□□ 0.11
PRPF18-202ENST00000378572 NID2Q14112 1375 aa15.71■□□□□ 0.11
PRPF18-202ENST00000378572 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 RXRAP19793 462 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 PDIA3P30101 505 aaKnown RBP15.71■□□□□ 0.1
PRPF18-202ENST00000378572 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.1
PRPF18-202ENST00000378572 HIC1Q14526 733 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 MBTPS1Q14703 1052 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 NLRX1Q86UT6 975 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 TGS1Q96RS0 853 aaKnown RBP15.71■□□□□ 0.1
PRPF18-202ENST00000378572 SPZ1Q9BXG8 430 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 SLKQ9H2G2 1235 aaPredicted RBP15.71■□□□□ 0.1
PRPF18-202ENST00000378572 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 BRPF3Q9ULD4 1205 aa15.71■□□□□ 0.1
PRPF18-202ENST00000378572 TCF20Q9UGU0 1960 aaKnown RBP15.7■□□□□ 0.1
PRPF18-202ENST00000378572 DOCK5Q9H7D0 1870 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 TREHO43280 583 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 PLEKHA8P1O95397 391 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 GNAT1P11488 350 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 DDIT3P35638 169 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 GNAQP50148 359 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 ARHGAP4P98171 946 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 APOA5Q6Q788 366 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRPF18-202ENST00000378572 CMTR1Q8N1G2 835 aaKnown RBP15.7■□□□□ 0.1
PRPF18-202ENST00000378572 DBF4BQ8NFT6 615 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 SEPT8Q92599 483 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
PRPF18-202ENST00000378572 LZTS2Q9BRK4 669 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 PKD2L1Q9P0L9 805 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 COG5Q9UP83 839 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
PRPF18-202ENST00000378572 TRANK1O15050 2925 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 SPATA31C2B4DYI2 1134 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 POU3F3P20264 500 aaPredicted RBP15.69■□□□□ 0.1
PRPF18-202ENST00000378572 TRAF7Q6Q0C0 670 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 CCDC83Q8IWF9 413 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 HLA-CQ95604 372 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 GPR20Q99678 358 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 SETD4Q9NVD3 440 aa15.69■□□□□ 0.1
PRPF18-202ENST00000378572 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
PRPF18-202ENST00000378572 LINC01553A4QN01 128 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 UPP2O95045 317 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 ICAM3P32942 547 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SYNE3Q6ZMZ3 975 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 CCDC82Q8N4S0 544 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 MAP3K14Q99558 947 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 LLPHQ9BRT6 129 aaKnown RBP15.68■□□□□ 0.1
PRPF18-202ENST00000378572 RNPEPQ9H4A4 650 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 hCG_1642624A0A1W2PR95 340 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 ZBTB43O43298 467 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 CALM1P0DP23 149 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 CALM2P0DP24 149 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 CALM3P0DP25 149 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SCRN1Q12765 414 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 MICU3Q86XE3 530 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 NECAB1Q8N987 351 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 FBXO22Q8NEZ5 403 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 YME1L1Q96TA2 773 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 INSL6Q9Y581 213 aa15.68■□□□□ 0.1
PRPF18-202ENST00000378572 SPDYE3A6NKU9 549 aa15.67■□□□□ 0.1
PRPF18-202ENST00000378572 BMP1P13497 986 aa15.67■□□□□ 0.1
PRPF18-202ENST00000378572 STK3Q13188 491 aa15.67■□□□□ 0.1
PRPF18-202ENST00000378572 UBE2SQ16763 222 aa15.67■□□□□ 0.1
PRPF18-202ENST00000378572 XRRA1Q6P2D8 792 aa15.67■□□□□ 0.1
PRPF18-202ENST00000378572 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
PRPF18-202ENST00000378572 GIMAP8Q8ND71 665 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms