RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 HLA-DOAP06340 250 aa27.87■■■□□ 2.05
C9orf40-201ENST00000376854 C8orf74Q6P047 294 aa27.87■■■□□ 2.05
C9orf40-201ENST00000376854 MYO1CO00159 1063 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 EPHB4P54760 987 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 RAPGEF1Q13905 1077 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 CFAP221Q4G0U5 840 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.86■■■□□ 2.05
C9orf40-201ENST00000376854 TBC1D5Q92609 795 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 MS4A14Q96JA4 679 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 TRIM34Q9BYJ4 488 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 GLT8D2Q9H1C3 349 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 KCNMB3Q9NPA1 279 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 MYH7BA7E2Y1 1941 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 RAD21O60216 631 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 KRT18P05783 430 aaKnown RBP27.86■■■□□ 2.05
C9orf40-201ENST00000376854 NFIAQ12857 509 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 ADAM9Q13443 819 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 CDC42EP5Q6NZY7 148 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 FAM76AQ8TAV0 307 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 MYH10P35580 1976 aa27.86■■■□□ 2.05
C9orf40-201ENST00000376854 GOLGA6CA6NDK9 693 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 PALMO75781 387 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 GOLGA6DP0CG33 693 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 STAT3P40763 770 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 USP11P51784 963 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 ARID5AQ03989 594 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 NAB2Q15742 525 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 SLC18A3Q16572 532 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 QRICH1Q2TAL8 776 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.85■■■□□ 2.05
C9orf40-201ENST00000376854 ANO3Q9BYT9 981 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 ZHX3Q9H4I2 956 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 GOLGA6AQ9NYA3 693 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 PCDHA1Q9Y5I3 950 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 MED24O75448 989 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 EPS15P42566 896 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 ZFPM1Q8IX07 1006 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 ZFP91Q96JP5 570 aaPredicted RBP27.85■■■□□ 2.05
C9orf40-201ENST00000376854 KCNQ5Q9NR82 932 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 RNF14Q9UBS8 474 aa27.85■■■□□ 2.05
C9orf40-201ENST00000376854 GLE1Q53GS7 698 aaKnown RBP27.84■■■□□ 2.05
C9orf40-201ENST00000376854 EMBQ6PCB8 327 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 SLC26A4O43511 780 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 KLRC1P26715 233 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 KLHL30Q0D2K2 578 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 KRT27Q7Z3Y8 459 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 ZC3H3Q8IXZ2 948 aaKnown RBP27.84■■■□□ 2.05
C9orf40-201ENST00000376854 FAM133AQ8N9E0 248 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 PCDHAC2Q9Y5I4 1007 aa27.84■■■□□ 2.05
C9orf40-201ENST00000376854 TNFRSF8P28908 595 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 SLC12A3P55017 1021 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 EDRF1Q3B7T1 1238 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 ARSHQ5FYA8 562 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 APOBEC3HQ6NTF7 200 aaKnown RBP27.83■■■□□ 2.05
C9orf40-201ENST00000376854 PPP4R3CPQ6ZMV5 832 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 AIPL1Q9NZN9 384 aa27.83■■■□□ 2.05
C9orf40-201ENST00000376854 CYP3A7-CYP3A51PA0A087WV96 503 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 A0A087X0T9 212 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 FRMD3A2A2Y4 597 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 POTEFA5A3E0 1075 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 CETN3O15182 167 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 FTCDO95954 541 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 FAM228BP0C875 321 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 POTEIP0CG38 1075 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 CYP3A7P24462 503 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 ENOX2Q16206 610 aaKnown RBP27.83■■■□□ 2.04
C9orf40-201ENST00000376854 SHROOM1Q2M3G4 852 aaPredicted RBP27.83■■■□□ 2.04
C9orf40-201ENST00000376854 POTEGQ6S5H5 508 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 POTEEQ6S8J3 1075 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 SLFN12Q8IYM2 578 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 GANQ9H2C0 597 aa27.83■■■□□ 2.04
C9orf40-201ENST00000376854 PITPNM2Q9BZ72 1349 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 DNA2P51530 1060 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 KCNH2Q12809 1159 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 ASIC2Q16515 512 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 DHX36Q9H2U1 1008 aaKnown RBP27.82■■■□□ 2.04
C9orf40-201ENST00000376854 ADAMTS1Q9UHI8 967 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 RSPH14Q9UHP6 348 aa27.82■■■□□ 2.04
C9orf40-201ENST00000376854 CACNB3P54284 484 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 KIAA0753Q2KHM9 967 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 COL23A1Q86Y22 540 aaPredicted RBP27.81■■■□□ 2.04
C9orf40-201ENST00000376854 CAVIN3Q969G5 261 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 CCDC17Q96LX7 622 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 QSER1Q2KHR3 1735 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 TRIM66O15016 1216 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 NR2F2P24468 414 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 CDC37Q16543 378 aaPredicted RBP27.81■■■□□ 2.04
C9orf40-201ENST00000376854 C10orf67Q8IYJ2 551 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 TSEN2Q8NCE0 465 aaKnown RBP27.81■■■□□ 2.04
C9orf40-201ENST00000376854 MBOAT7Q96N66 472 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 PCDHGC5Q9Y5F6 944 aa27.81■■■□□ 2.04
C9orf40-201ENST00000376854 FAM196BA6NMK8 535 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 GOLGA8KD6RF30 607 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 PPFIA4O75335 1185 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 NPR1P16066 1061 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 SH3GL2Q99962 352 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 BRWD3Q6RI45 1802 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 SHOX2O60902 331 aaPredicted RBP27.8■■■□□ 2.04
C9orf40-201ENST00000376854 CASP5P51878 434 aa27.8■■■□□ 2.04
C9orf40-201ENST00000376854 MEI1Q5TIA1 1274 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms