RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 USP40Q9NVE5 1235 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 PPP1R1BQ9UD71 204 aaPredicted RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 PCDHB6Q9Y5E3 794 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 WDR91A4D1P6 747 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 WASLO00401 505 aaPredicted RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 KRT75O95678 551 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 MLH1P40692 756 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 GRIK3Q13003 919 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 CYP4F22Q6NT55 531 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 KIF6Q6ZMV9 814 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 CMTR1Q8N1G2 835 aaKnown RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 CNBD1Q8NA66 436 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 C17orf50Q8WW18 174 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 DCTN4Q9UJW0 460 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 GDAQ9Y2T3 454 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 E9PCH4 1651 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 RAD51CO43502 376 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 GMNNO75496 209 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 MMEL1Q495T6 779 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 ANO5Q75V66 913 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 DDX42Q86XP3 938 aaKnown RBP eCLIP11.07□□□□□ -0.64
CD28-202ENST00000374481 GALNT15Q8N3T1 639 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 HDAC7Q8WUI4 952 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 FAM129AQ9BZQ8 928 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 CAPN9O14815 690 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 STAT1P42224 750 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 ADARP55265 1226 aaKnown RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 NR5A1Q13285 461 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 MAN2A1Q16706 1144 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 LRRC36Q1X8D7 754 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 RBBP8NLQ8NC74 664 aaPredicted RBP11.07□□□□□ -0.64
CD28-202ENST00000374481 TRIM55Q9BYV6 548 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 PANK4Q9NVE7 773 aa11.07□□□□□ -0.64
CD28-202ENST00000374481 MAP3K19Q56UN5 1328 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 A0A1W2PQC6 194 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 SRRM3A6NNA2 597 aaPredicted RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 LGR5O75473 907 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 FGAP02671 866 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ATF2P15336 505 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 PRR16Q569H4 304 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 DAB2IPQ5VWQ8 1189 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ICA1LQ8NDH6 482 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 SH3GL2Q99962 352 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 VAT1LQ9HCJ6 419 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 SUCLA2Q9P2R7 463 aaPredicted RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 A1BGP04217 495 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 CALB2P22676 271 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 PSMC1P62191 440 aaKnown RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 RGS9BPQ6ZS82 235 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
CD28-202ENST00000374481 SLITRK6Q9H5Y7 841 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ARMCX3Q9UH62 379 aaPredicted RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 LIMA1Q9UHB6 759 aaKnown RBP11.06□□□□□ -0.64
CD28-202ENST00000374481 ZNF148Q9UQR1 794 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 RASA4BC9J798 803 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 RASA4O43374 803 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 SERPING1P05155 500 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 PGM1P36871 562 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 HAUS3Q68CZ6 603 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 CABP7Q86V35 215 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 EPAS1Q99814 870 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
CD28-202ENST00000374481 DPPA5A6NC42 116 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 CCDC22O60826 627 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 APOEP02649 317 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 CCNE1P24864 410 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
CD28-202ENST00000374481 STXBP4Q6ZWJ1 553 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 ATP6V0A1Q93050 837 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 HAUS7Q99871 368 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 HSPA6P17066 643 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 YY1P25490 414 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 INAQ16352 499 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 ANKRD20A4Q4UJ75 823 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
CD28-202ENST00000374481 PAF1Q8N7H5 531 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 TATDN2Q93075 761 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 MPP4Q96JB8 637 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms